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The map label for this gene is 89056272

Identifier: 89056272

GI number: 89056272

Start: 3865487

End: 3865981

Strand: Direct

Name: 89056272

Synonym: Jann_3781

Alternate gene names: NA

Gene position: 3865487-3865981 (Clockwise)

Preceding gene: 89056267

Following gene: 89056275

Centisome position: 89.52

GC content: 60.0

Gene sequence:

>495_bases
ATGGAGCAATCTCTTTTTCCCGGCTACGCTTCGGTCATGAAATTAATCGACATCCTCGACGCCACGCCCTTCCCGATCGG
CTACCGTATCGCGTTTCTTACCAACTTCTGGCGCGAGCCGCTTTTGCGCCGGATGGAGCGTACCACTGGTCTGATCCGGC
CGGAACTCACGGTTTTGATGTGCTTGAATTTTCAGCGCGACCTCCATGCACGTGACATCTGCGAGATCACCGAGCAGCCG
TCAAACACCGTCAGCCGCGCCGTGTCCTCGCTTGAGAAAAAGGGGTATCTGTCGCGCCAGCGCGACCATCTGGACACCCG
GCGGCAGGTCCTGAACACGACGGCGGAGGGCACGGACGTGCATGACGGCATCATGGAGAGCTTTGCCGTAGCGGAGGCGC
GGATGCTGGACGTTCTGAGCCAGCAAGAGCGTGTGGTTCTTGAGGGCCTGCTGGATAAGCTGGCGCGCAGTGTCGAGGAT
TGGCGCGTCGCATAG

Upstream 100 bases:

>100_bases
CAGCACCAGCAAGGCAAAAGCCAATGCCGTGACGGCGCGGTCCCCGAGTTTCAAATAGCTCTCCCCCAATATCGCTCCAT
ATGGAACGATATAATTCCAT

Downstream 100 bases:

>100_bases
GCGCATCTAGATCACGCCATCGGCCTTCAATTGAGCGATCTGGTCGTCGGAATACCCCGCCTCCCGCAGGACAGTCTCGG
TATCGCCCCCAAGCTCCGGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR/EmrR Family; Sugar-Specific Transcriptional Regulator TrmB Family

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEQSLFPGYASVMKLIDILDATPFPIGYRIAFLTNFWREPLLRRMERTTGLIRPELTVLMCLNFQRDLHARDICEITEQP
SNTVSRAVSSLEKKGYLSRQRDHLDTRRQVLNTTAEGTDVHDGIMESFAVAEARMLDVLSQQERVVLEGLLDKLARSVED
WRVA

Sequences:

>Translated_164_residues
MEQSLFPGYASVMKLIDILDATPFPIGYRIAFLTNFWREPLLRRMERTTGLIRPELTVLMCLNFQRDLHARDICEITEQP
SNTVSRAVSSLEKKGYLSRQRDHLDTRRQVLNTTAEGTDVHDGIMESFAVAEARMLDVLSQQERVVLEGLLDKLARSVED
WRVA
>Mature_164_residues
MEQSLFPGYASVMKLIDILDATPFPIGYRIAFLTNFWREPLLRRMERTTGLIRPELTVLMCLNFQRDLHARDICEITEQP
SNTVSRAVSSLEKKGYLSRQRDHLDTRRQVLNTTAEGTDVHDGIMESFAVAEARMLDVLSQQERVVLEGLLDKLARSVED
WRVA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18852; Mature: 18852

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSLFPGYASVMKLIDILDATPFPIGYRIAFLTNFWREPLLRRMERTTGLIRPELTVLM
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CLNFQRDLHARDICEITEQPSNTVSRAVSSLEKKGYLSRQRDHLDTRRQVLNTTAEGTDV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HDGIMESFAVAEARMLDVLSQQERVVLEGLLDKLARSVEDWRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQSLFPGYASVMKLIDILDATPFPIGYRIAFLTNFWREPLLRRMERTTGLIRPELTVLM
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CLNFQRDLHARDICEITEQPSNTVSRAVSSLEKKGYLSRQRDHLDTRRQVLNTTAEGTDV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HDGIMESFAVAEARMLDVLSQQERVVLEGLLDKLARSVEDWRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA