| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yflP [H]
Identifier: 89056275
GI number: 89056275
Start: 3868411
End: 3869394
Strand: Direct
Name: yflP [H]
Synonym: Jann_3784
Alternate gene names: 89056275
Gene position: 3868411-3869394 (Clockwise)
Preceding gene: 89056272
Following gene: 89056276
Centisome position: 89.59
GC content: 62.09
Gene sequence:
>984_bases ATGGGAGTACGCACCCTCGTTTCCGCCAAAATGGCGTTCGCAACGGCCGCAACGGCCTTCATGCTATCCGCCGCCCCGCA GATGGCCCAGGCCGATGAATGCATCGCGCCGTCCAACCCCGGCGGCGGGTGGGATTTCACCTGCCGTACCATCGGGCGCA TCCTGTCCGAGTTGAATCTAGTCGATGGCAACGTTCAGATCACCAACATGCCCGGCGGTGTCGGTGCGGTGACCTACGCG ATGGTGGACGCGGAACGCTCTGACGACGCATCTCTGTTTGTTGCCACATCGACGGTCGGCGTCACGCAGATTGCCCAGGG GCGCTACCCGTCGGGAATCGACACGATGCGCTACCTTGGAATGTTGGGCGCGGATGTGGGCGTGATCGCCGTGGCCGCCG ACAGTGAATTTGAAAGCCTTGCGCAGTTGAACGAGGCGATTGTCGCCGACCCGTCGTCGGTCGTGACCGCAGGATCATCG GGCGCGGGTGGATGGGACCATATTCGTTTGCTTATGGTTGCGCGCGAAGGCGGTCTGGAAGACCTGCCCGCCCTGCGTTG GGTGCAATTCGACGGTGGCACCGATGCGGTTACGCAGATGATGGGCGGGCAGCTTGATGTCGTGTCCACGGACCTTGGTG AGATTGCGGGTTTTGTGGAATCCGGTGACATTCGCATCCTTGCGGCGCTCTCCAGCGACCCGATCCCCGCCTTCCCCGAG ATCCCGACGGCGATCAGTCAGGGCATCGACGTGACGGGGTACAACTGGCGTGGCCTCTACACCGGCGGCGACGTCTCAGA CGAAGACTACAACGCCCGCGTCACCCAGTTGGAGACACTTTACAACTCCGACGAATGGCAGACGGCCGCCGTGGAATTCG GCCTTGTGCCGATCTGGCGTGGTGGAGCCGAGTTTGAGGCCTACGTCCGCGAACAAGAACAGGTCATGGCCGAAATTTCG CGCGACATCGGCGTGATTGAATGA
Upstream 100 bases:
>100_bases TTTGCCCGCCACCGGGGCCGTGTCGGCATGTTGAGGGCTTGAAATCTGTCGCATCCTCCCGTCTTTTTGAGCTTGGTTTT ATCAGGGAGGATCAAGACCA
Downstream 100 bases:
>100_bases GCATCAGGCTTGCGGGCGTCGCGATCTTCGTGATCGCGGCGCTCTATGCCTGGACGGCGCAGGATTACACCGCCTCCTTC GGCGATGTCCTTGGGCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MGVRTLVSAKMAFATAATAFMLSAAPQMAQADECIAPSNPGGGWDFTCRTIGRILSELNLVDGNVQITNMPGGVGAVTYA MVDAERSDDASLFVATSTVGVTQIAQGRYPSGIDTMRYLGMLGADVGVIAVAADSEFESLAQLNEAIVADPSSVVTAGSS GAGGWDHIRLLMVAREGGLEDLPALRWVQFDGGTDAVTQMMGGQLDVVSTDLGEIAGFVESGDIRILAALSSDPIPAFPE IPTAISQGIDVTGYNWRGLYTGGDVSDEDYNARVTQLETLYNSDEWQTAAVEFGLVPIWRGGAEFEAYVREQEQVMAEIS RDIGVIE
Sequences:
>Translated_327_residues MGVRTLVSAKMAFATAATAFMLSAAPQMAQADECIAPSNPGGGWDFTCRTIGRILSELNLVDGNVQITNMPGGVGAVTYA MVDAERSDDASLFVATSTVGVTQIAQGRYPSGIDTMRYLGMLGADVGVIAVAADSEFESLAQLNEAIVADPSSVVTAGSS GAGGWDHIRLLMVAREGGLEDLPALRWVQFDGGTDAVTQMMGGQLDVVSTDLGEIAGFVESGDIRILAALSSDPIPAFPE IPTAISQGIDVTGYNWRGLYTGGDVSDEDYNARVTQLETLYNSDEWQTAAVEFGLVPIWRGGAEFEAYVREQEQVMAEIS RDIGVIE >Mature_326_residues GVRTLVSAKMAFATAATAFMLSAAPQMAQADECIAPSNPGGGWDFTCRTIGRILSELNLVDGNVQITNMPGGVGAVTYAM VDAERSDDASLFVATSTVGVTQIAQGRYPSGIDTMRYLGMLGADVGVIAVAADSEFESLAQLNEAIVADPSSVVTAGSSG AGGWDHIRLLMVAREGGLEDLPALRWVQFDGGTDAVTQMMGGQLDVVSTDLGEIAGFVESGDIRILAALSSDPIPAFPEI PTAISQGIDVTGYNWRGLYTGGDVSDEDYNARVTQLETLYNSDEWQTAAVEFGLVPIWRGGAEFEAYVREQEQVMAEISR DIGVIE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34480; Mature: 34349
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRTLVSAKMAFATAATAFMLSAAPQMAQADECIAPSNPGGGWDFTCRTIGRILSELNL CCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEE VDGNVQITNMPGGVGAVTYAMVDAERSDDASLFVATSTVGVTQIAQGRYPSGIDTMRYLG ECCCEEEEECCCCCHHEEEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCCCHHHHHHHH MLGADVGVIAVAADSEFESLAQLNEAIVADPSSVVTAGSSGAGGWDHIRLLMVAREGGLE HHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHEECCCCCCCCHHHEEEEEEECCCCCC DLPALRWVQFDGGTDAVTQMMGGQLDVVSTDLGEIAGFVESGDIRILAALSSDPIPAFPE CCCCEEEEEECCCHHHHHHHHCCCEEEEECCHHHHHHHEECCCEEEEEEECCCCCCCCCC IPTAISQGIDVTGYNWRGLYTGGDVSDEDYNARVTQLETLYNSDEWQTAAVEFGLVPIWR CCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEEEEC GGAEFEAYVREQEQVMAEISRDIGVIE CCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GVRTLVSAKMAFATAATAFMLSAAPQMAQADECIAPSNPGGGWDFTCRTIGRILSELNL CCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEE VDGNVQITNMPGGVGAVTYAMVDAERSDDASLFVATSTVGVTQIAQGRYPSGIDTMRYLG ECCCEEEEECCCCCHHEEEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCCCHHHHHHHH MLGADVGVIAVAADSEFESLAQLNEAIVADPSSVVTAGSSGAGGWDHIRLLMVAREGGLE HHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHEECCCCCCCCHHHEEEEEEECCCCCC DLPALRWVQFDGGTDAVTQMMGGQLDVVSTDLGEIAGFVESGDIRILAALSSDPIPAFPE CCCCEEEEEECCCHHHHHHHHCCCEEEEECCHHHHHHHEECCCEEEEEEECCCCCCCCCC IPTAISQGIDVTGYNWRGLYTGGDVSDEDYNARVTQLETLYNSDEWQTAAVEFGLVPIWR CCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEEEEC GGAEFEAYVREQEQVMAEISRDIGVIE CCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]