Click here to switch to the map view.

The map label for this gene is 89056138

Identifier: 89056138

GI number: 89056138

Start: 3720676

End: 3721203

Strand: Direct

Name: 89056138

Synonym: Jann_3647

Alternate gene names: NA

Gene position: 3720676-3721203 (Clockwise)

Preceding gene: 89056137

Following gene: 89056139

Centisome position: 86.17

GC content: 59.09

Gene sequence:

>528_bases
ATGAGCGCGTTTTCCGCCCGCCACATCTGGACCTATCGCGCCGTCTTCTTCGGACTGAGCCTTGGCATGATCACCCTGAA
ACTTTTGCCATTGAACCTCGCGGCCAGTGGCATCCCCGGCCCCGATATCCTTGTGGCGATGGCGATGGCCTGGATGGTGC
GCCAGCCTGCGCTTGTGCCCATCGGGCTCTTGCTCGTCGTCTTTTTGTTGGCCGATTTCCTGTTCATGCGCCCTCCCGGC
CTTTGGACCGCGCTTTTGCTGATCGCGGCAGAGGCATTGCGCCGACGTCGGCTGACCATGGCAGAACTGCCGTTTCTGGT
GGAATGGAGCACGGTCGCCGTCCTGATCATGGGCATGGTTTTGCTCAACCGTCTGATCCTTTGGATGCTGCTGGTGGATT
TGAACTCGCTGGGTCTTACGTTGGCCCACGGAATCGTGACAATCGCAATCTATCCGATCGTCGTCGCCGTCTCGAAATTC
GTGTTCGGAGTCCGTAAACTGGGCCCGACCGAGCTGGAAGCCCTGTAA

Upstream 100 bases:

>100_bases
CCGCCGACCTCATTGGTCCGCCCTGGCCGCCGGAAGGTATGGAGCTGGATGACGAGGGTGAGTTGATCCCACTCGACAGC
GCGCGCGCATTGGTCACAGA

Downstream 100 bases:

>100_bases
GAGCCGCTATGAAACGCACCGCCAAAGAGATTGAGGACAGCACGCGCCAGATCGGCCGCCGCAGCCTTATCGTGGGCGGC
CTCTTTGGGGGCACCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Rod Shape-Determining Protein MreD

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSAFSARHIWTYRAVFFGLSLGMITLKLLPLNLAASGIPGPDILVAMAMAWMVRQPALVPIGLLLVVFLLADFLFMRPPG
LWTALLLIAAEALRRRRLTMAELPFLVEWSTVAVLIMGMVLLNRLILWMLLVDLNSLGLTLAHGIVTIAIYPIVVAVSKF
VFGVRKLGPTELEAL

Sequences:

>Translated_175_residues
MSAFSARHIWTYRAVFFGLSLGMITLKLLPLNLAASGIPGPDILVAMAMAWMVRQPALVPIGLLLVVFLLADFLFMRPPG
LWTALLLIAAEALRRRRLTMAELPFLVEWSTVAVLIMGMVLLNRLILWMLLVDLNSLGLTLAHGIVTIAIYPIVVAVSKF
VFGVRKLGPTELEAL
>Mature_174_residues
SAFSARHIWTYRAVFFGLSLGMITLKLLPLNLAASGIPGPDILVAMAMAWMVRQPALVPIGLLLVVFLLADFLFMRPPGL
WTALLLIAAEALRRRRLTMAELPFLVEWSTVAVLIMGMVLLNRLILWMLLVDLNSLGLTLAHGIVTIAIYPIVVAVSKFV
FGVRKLGPTELEAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19263; Mature: 19132

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFSARHIWTYRAVFFGLSLGMITLKLLPLNLAASGIPGPDILVAMAMAWMVRQPALVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
IGLLLVVFLLADFLFMRPPGLWTALLLIAAEALRRRRLTMAELPFLVEWSTVAVLIMGMV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LLNRLILWMLLVDLNSLGLTLAHGIVTIAIYPIVVAVSKFVFGVRKLGPTELEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
SAFSARHIWTYRAVFFGLSLGMITLKLLPLNLAASGIPGPDILVAMAMAWMVRQPALVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
IGLLLVVFLLADFLFMRPPGLWTALLLIAAEALRRRRLTMAELPFLVEWSTVAVLIMGMV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LLNRLILWMLLVDLNSLGLTLAHGIVTIAIYPIVVAVSKFVFGVRKLGPTELEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA