| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is mreC [H]
Identifier: 89056137
GI number: 89056137
Start: 3719744
End: 3720679
Strand: Direct
Name: mreC [H]
Synonym: Jann_3646
Alternate gene names: 89056137
Gene position: 3719744-3720679 (Clockwise)
Preceding gene: 89056136
Following gene: 89056138
Centisome position: 86.15
GC content: 63.68
Gene sequence:
>936_bases ATGGCCCGGGACACCTACGACGATTCCTATTCCCGCCCCGTCCGGCGTCTGCTGCTGGCGGTGCTGGTGCTGTTTTTGTT GTCACTTGTGCTGATCTGGCGGATCGACAATCCGCGCGTTGAACGCATCCGCGCCGCGATTATCGACCGGTATGTGCCCA ACATGGAATGGGTCATGGCTCCCGTCACCGGCATAGCGCGGATGGCGGAAGACTTCCAAAGCTACACGCGGCTGTTCGAG CAGAACCAGGAACTCCGCCGCGAATTGCAACAGATGCGAGCCTGGCGCGAGGCGGCGCTGCAGCTGGAACAGGAAAACGC GCGTCTGTTGGACCTGAACCGCGTGCAATTGGACCCGGAACTGACCTTCGTGACCGGGATCGTGCTGGCGGATTCGGGCT CGCCCTTCCGGCGCTCGGTACTGCTGAACGTGGGCGCGCGCGATGGCATCCTGGACGGATGGGCCACGATGGACGGGCTC GGCGTCGTGGGCCGGATCTCGGGCGTGGGCGACCGCACCAGCCGCGTTTTGTTGCTGACGGATGCCGCCAGCCGCATTCC GGTAACGATCCAACCCTCCGGCCAGCAGGCCCTGTTGATGGGCGATAATACCGGCACGCCAATCCTCGATTTCATTGACG ATGATGAAGATGTAGCCGCAGGCGACCGCATCGTGACGTCCGGCGATGGTGGCCTGTTTCCGCCCGGTCTTCTGGTGGGA CAAGTGGTCTTCACGTCCGACAGGCGCATGCGTGCGCGCATGTCTGCGGACCTGCAACGCCTGAACTTCATGCGGGTGAT GCGCAGCCATCCGGGCACGACGCTCGACAGCCCCGCCGACCTCATTGGTCCGCCCTGGCCGCCGGAAGGTATGGAGCTGG ATGACGAGGGTGAGTTGATCCCACTCGACAGCGCGCGCGCATTGGTCACAGAATGA
Upstream 100 bases:
>100_bases GGCACCGGCAAGGCATTGGAGTATGAGAATCTCCTGCGCCATGCGATAGATTACGACAGCTAACACCCAGCGTTGCGACC GTTTCCCCGAAAGGCGACCG
Downstream 100 bases:
>100_bases GCGCGTTTTCCGCCCGCCACATCTGGACCTATCGCGCCGTCTTCTTCGGACTGAGCCTTGGCATGATCACCCTGAAACTT TTGCCATTGAACCTCGCGGC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MARDTYDDSYSRPVRRLLLAVLVLFLLSLVLIWRIDNPRVERIRAAIIDRYVPNMEWVMAPVTGIARMAEDFQSYTRLFE QNQELRRELQQMRAWREAALQLEQENARLLDLNRVQLDPELTFVTGIVLADSGSPFRRSVLLNVGARDGILDGWATMDGL GVVGRISGVGDRTSRVLLLTDAASRIPVTIQPSGQQALLMGDNTGTPILDFIDDDEDVAAGDRIVTSGDGGLFPPGLLVG QVVFTSDRRMRARMSADLQRLNFMRVMRSHPGTTLDSPADLIGPPWPPEGMELDDEGELIPLDSARALVTE
Sequences:
>Translated_311_residues MARDTYDDSYSRPVRRLLLAVLVLFLLSLVLIWRIDNPRVERIRAAIIDRYVPNMEWVMAPVTGIARMAEDFQSYTRLFE QNQELRRELQQMRAWREAALQLEQENARLLDLNRVQLDPELTFVTGIVLADSGSPFRRSVLLNVGARDGILDGWATMDGL GVVGRISGVGDRTSRVLLLTDAASRIPVTIQPSGQQALLMGDNTGTPILDFIDDDEDVAAGDRIVTSGDGGLFPPGLLVG QVVFTSDRRMRARMSADLQRLNFMRVMRSHPGTTLDSPADLIGPPWPPEGMELDDEGELIPLDSARALVTE >Mature_310_residues ARDTYDDSYSRPVRRLLLAVLVLFLLSLVLIWRIDNPRVERIRAAIIDRYVPNMEWVMAPVTGIARMAEDFQSYTRLFEQ NQELRRELQQMRAWREAALQLEQENARLLDLNRVQLDPELTFVTGIVLADSGSPFRRSVLLNVGARDGILDGWATMDGLG VVGRISGVGDRTSRVLLLTDAASRIPVTIQPSGQQALLMGDNTGTPILDFIDDDEDVAAGDRIVTSGDGGLFPPGLLVGQ VVFTSDRRMRARMSADLQRLNFMRVMRSHPGTTLDSPADLIGPPWPPEGMELDDEGELIPLDSARALVTE
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 34624; Mature: 34493
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDTYDDSYSRPVRRLLLAVLVLFLLSLVLIWRIDNPRVERIRAAIIDRYVPNMEWVMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHH PVTGIARMAEDFQSYTRLFEQNQELRRELQQMRAWREAALQLEQENARLLDLNRVQLDPE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEECCC LTFVTGIVLADSGSPFRRSVLLNVGARDGILDGWATMDGLGVVGRISGVGDRTSRVLLLT EEEEEEEEEECCCCCHHHEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEE DAASRIPVTIQPSGQQALLMGDNTGTPILDFIDDDEDVAAGDRIVTSGDGGLFPPGLLVG CCCCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHH QVVFTSDRRMRARMSADLQRLNFMRVMRSHPGTTLDSPADLIGPPWPPEGMELDDEGELI HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEE PLDSARALVTE ECCCCCHHCCC >Mature Secondary Structure ARDTYDDSYSRPVRRLLLAVLVLFLLSLVLIWRIDNPRVERIRAAIIDRYVPNMEWVMA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHH PVTGIARMAEDFQSYTRLFEQNQELRRELQQMRAWREAALQLEQENARLLDLNRVQLDPE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEECCC LTFVTGIVLADSGSPFRRSVLLNVGARDGILDGWATMDGLGVVGRISGVGDRTSRVLLLT EEEEEEEEEECCCCCHHHEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEE DAASRIPVTIQPSGQQALLMGDNTGTPILDFIDDDEDVAAGDRIVTSGDGGLFPPGLLVG CCCCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHH QVVFTSDRRMRARMSADLQRLNFMRVMRSHPGTTLDSPADLIGPPWPPEGMELDDEGELI HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEE PLDSARALVTE ECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]