The gene/protein map for NC_007948 is currently unavailable.
Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055853

Identifier: 89055853

GI number: 89055853

Start: 3414864

End: 3415385

Strand: Direct

Name: 89055853

Synonym: Jann_3362

Alternate gene names: NA

Gene position: 3414864-3415385 (Clockwise)

Preceding gene: 89055852

Following gene: 89055854

Centisome position: 79.08

GC content: 63.03

Gene sequence:

>522_bases
TTGCGCTTTCTTATCACCCTTCTCGCCGCCGCCACTCTCACCGCGCCCGCGCAAGCCGATACCCATTGGCCCGGCCCGGG
CGACATCGTAACACCCCATGCCACGGGTCTTCACCTCAGCAGCGCCGATGGCACATCGCGCGAGGGGATGCCGTTTGGCA
GCCCGTTTCAGGCCATAATGCACACCCTTGTGTCGATATTTGGCCACGAGGTTTCTGTCGGCTTTCCGCAGGATTGTGGC
GAAGGTCCGATGGTGTCCGTCGACATCCCGGGCCAGATCAACTTGATGTTCCAGGATGATCGGCTTGCCGGTTGGATGCT
GATTGACGAGAGCGCGCTTCGGACCACCATGGGGCTGGCGGTTGGCAGCGCGCGTGCCGACCTTGCGATGGAGGGCGCGG
TGAATTTCTTCGAGACCGGCATCGGGACAGAGTTCAGCGCGGGCCCCCTTTTCGGCCTGCTGTCCGACGACAGCGAAACG
GTGCAGGGCATCTGGTCCGGGGCCACCTGCATTTTCCGCTAG

Upstream 100 bases:

>100_bases
CGTCTGAAGTCACGCGGCAGGGCAGGTATCCCCGCCTTGTCGTGACGCCCCAACTGGCGCGTTACTGTGGTACCGCGTTT
CGCGACAGTTGGAGGTTCCC

Downstream 100 bases:

>100_bases
ACGCGCACGGGGTCTGGCGGCGCGCAGGCGCATGGCCTAAGCCTGCCACAGGCCAAAACCGGAGCGCACCATGACCCGCA
TTGTCGAATCCCTTGCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRFLITLLAAATLTAPAQADTHWPGPGDIVTPHATGLHLSSADGTSREGMPFGSPFQAIMHTLVSIFGHEVSVGFPQDCG
EGPMVSVDIPGQINLMFQDDRLAGWMLIDESALRTTMGLAVGSARADLAMEGAVNFFETGIGTEFSAGPLFGLLSDDSET
VQGIWSGATCIFR

Sequences:

>Translated_173_residues
MRFLITLLAAATLTAPAQADTHWPGPGDIVTPHATGLHLSSADGTSREGMPFGSPFQAIMHTLVSIFGHEVSVGFPQDCG
EGPMVSVDIPGQINLMFQDDRLAGWMLIDESALRTTMGLAVGSARADLAMEGAVNFFETGIGTEFSAGPLFGLLSDDSET
VQGIWSGATCIFR
>Mature_173_residues
MRFLITLLAAATLTAPAQADTHWPGPGDIVTPHATGLHLSSADGTSREGMPFGSPFQAIMHTLVSIFGHEVSVGFPQDCG
EGPMVSVDIPGQINLMFQDDRLAGWMLIDESALRTTMGLAVGSARADLAMEGAVNFFETGIGTEFSAGPLFGLLSDDSET
VQGIWSGATCIFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18201; Mature: 18201

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLITLLAAATLTAPAQADTHWPGPGDIVTPHATGLHLSSADGTSREGMPFGSPFQAIM
CHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHH
HTLVSIFGHEVSVGFPQDCGEGPMVSVDIPGQINLMFQDDRLAGWMLIDESALRTTMGLA
HHHHHHHCCCEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECHHHHHHHHHHH
VGSARADLAMEGAVNFFETGIGTEFSAGPLFGLLSDDSETVQGIWSGATCIFR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEC
>Mature Secondary Structure
MRFLITLLAAATLTAPAQADTHWPGPGDIVTPHATGLHLSSADGTSREGMPFGSPFQAIM
CHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHH
HTLVSIFGHEVSVGFPQDCGEGPMVSVDIPGQINLMFQDDRLAGWMLIDESALRTTMGLA
HHHHHHHCCCEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECHHHHHHHHHHH
VGSARADLAMEGAVNFFETGIGTEFSAGPLFGLLSDDSETVQGIWSGATCIFR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA