| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055854
Identifier: 89055854
GI number: 89055854
Start: 3415456
End: 3416328
Strand: Direct
Name: 89055854
Synonym: Jann_3363
Alternate gene names: NA
Gene position: 3415456-3416328 (Clockwise)
Preceding gene: 89055853
Following gene: 89055855
Centisome position: 79.1
GC content: 61.86
Gene sequence:
>873_bases ATGACCCGCATTGTCGAATCCCTTGCCGAAATCTCGGACCTCTATGACGCCGTGTTCTGTGACCTTTGGGGATGCGTCCA CGACGGAATCACTGCCTTTGACGAGGCGATCGAGGCATTGCGCGCGTTCAAGGCCAAGGGCGGCACTGTCCTTCTGCTGA CCAACGCGCCGCGCCCGCGTGCCAGCGTGGCAACGCAGCTGGACGACTTCGGAATACCGCGCGACTGTTGGGACGTCATT GCAACCTCGGGCGACAGCGCGCGCGCGGCTATGCTGTCGGGCGCGGTCGGCACGAAGGTCTGGCACATCGGCGAGCCGGA GCATGCCCCATTTTTTGCGCCAATGGATCTGGTCGCCGACGCCGTTGATGTCACGCGTGTGCCACTGGACGAGGCCGAGG GGATCGTGTGCACTGGCCCGTTTGACCCCAAAGCGGACCCATCTGAATTGCGCCCGCAGTTCCTTCTGGCGAAAACCCGA CGCCTGAAATTGTTGTGCGCCAACCCCGATATCGTCGTGGATCGCGGCGAAAGTCGGGAATGGTGTGCGGGTGCCCTGGC AAAGCTCTACACCGAGATGGGGGGGGAAAGTCTGTATTTCGGCAAGCCGCACCCCCCGATTTATGACCTGGCGCGGCGAC GTTTGGTGCAAATGGGCAAGCCCACGCCCGATGATCGCATCCTCGCCATCGGCGACGGGATCGTCACGGATGTACCCGGC GGCATCGGTGAAAACATAGATACGCTGTTCATCACCGGCGGGCTCGCCCGCGATGAAACCGGGACCGATCACCAACCGGA CCCCGCAAAACTGGCCCGTTTTTTGACCGATGCGCAGTTGGAACCGACCTATTCTGTCGGTATGCTCCGATAA
Upstream 100 bases:
>100_bases TGGTCCGGGGCCACCTGCATTTTCCGCTAGACGCGCACGGGGTCTGGCGGCGCGCAGGCGCATGGCCTAAGCCTGCCACA GGCCAAAACCGGAGCGCACC
Downstream 100 bases:
>100_bases CGGGCGCGCAACAAAGTTGCGATCAGCGGTAAAATATTCACCTTTTATTACACACAGGCGTTGCAGACTGACCCATCCTT GCCCTATGAGAGGGCCATGG
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Hydrolase; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Domain Protein Hydrolase; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPRASVATQLDDFGIPRDCWDVI ATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVADAVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTR RLKLLCANPDIVVDRGESREWCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR
Sequences:
>Translated_290_residues MTRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPRASVATQLDDFGIPRDCWDVI ATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVADAVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTR RLKLLCANPDIVVDRGESREWCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR >Mature_289_residues TRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPRASVATQLDDFGIPRDCWDVIA TSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVADAVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTRR LKLLCANPDIVVDRGESREWCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPGG IGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR
Specific function: Unknown
COG id: COG0647
COG function: function code G; Predicted sugar phosphatases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31375; Mature: 31244
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH ASVATQLDDFGIPRDCWDVIATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVAD HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHH AVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTRRLKLLCANPDIVVDRGESRE HHHHHCCCHHHCCCEEEECCCCCCCCHHHHCHHHHHHHHHEEEEEECCCCEEEECCCCHH WCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH ASVATQLDDFGIPRDCWDVIATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVAD HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHH AVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTRRLKLLCANPDIVVDRGESRE HHHHHCCCHHHCCCEEEECCCCCCCCHHHHCHHHHHHHHHEEEEEECCCCEEEECCCCHH WCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA