Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055854

Identifier: 89055854

GI number: 89055854

Start: 3415456

End: 3416328

Strand: Direct

Name: 89055854

Synonym: Jann_3363

Alternate gene names: NA

Gene position: 3415456-3416328 (Clockwise)

Preceding gene: 89055853

Following gene: 89055855

Centisome position: 79.1

GC content: 61.86

Gene sequence:

>873_bases
ATGACCCGCATTGTCGAATCCCTTGCCGAAATCTCGGACCTCTATGACGCCGTGTTCTGTGACCTTTGGGGATGCGTCCA
CGACGGAATCACTGCCTTTGACGAGGCGATCGAGGCATTGCGCGCGTTCAAGGCCAAGGGCGGCACTGTCCTTCTGCTGA
CCAACGCGCCGCGCCCGCGTGCCAGCGTGGCAACGCAGCTGGACGACTTCGGAATACCGCGCGACTGTTGGGACGTCATT
GCAACCTCGGGCGACAGCGCGCGCGCGGCTATGCTGTCGGGCGCGGTCGGCACGAAGGTCTGGCACATCGGCGAGCCGGA
GCATGCCCCATTTTTTGCGCCAATGGATCTGGTCGCCGACGCCGTTGATGTCACGCGTGTGCCACTGGACGAGGCCGAGG
GGATCGTGTGCACTGGCCCGTTTGACCCCAAAGCGGACCCATCTGAATTGCGCCCGCAGTTCCTTCTGGCGAAAACCCGA
CGCCTGAAATTGTTGTGCGCCAACCCCGATATCGTCGTGGATCGCGGCGAAAGTCGGGAATGGTGTGCGGGTGCCCTGGC
AAAGCTCTACACCGAGATGGGGGGGGAAAGTCTGTATTTCGGCAAGCCGCACCCCCCGATTTATGACCTGGCGCGGCGAC
GTTTGGTGCAAATGGGCAAGCCCACGCCCGATGATCGCATCCTCGCCATCGGCGACGGGATCGTCACGGATGTACCCGGC
GGCATCGGTGAAAACATAGATACGCTGTTCATCACCGGCGGGCTCGCCCGCGATGAAACCGGGACCGATCACCAACCGGA
CCCCGCAAAACTGGCCCGTTTTTTGACCGATGCGCAGTTGGAACCGACCTATTCTGTCGGTATGCTCCGATAA

Upstream 100 bases:

>100_bases
TGGTCCGGGGCCACCTGCATTTTCCGCTAGACGCGCACGGGGTCTGGCGGCGCGCAGGCGCATGGCCTAAGCCTGCCACA
GGCCAAAACCGGAGCGCACC

Downstream 100 bases:

>100_bases
CGGGCGCGCAACAAAGTTGCGATCAGCGGTAAAATATTCACCTTTTATTACACACAGGCGTTGCAGACTGACCCATCCTT
GCCCTATGAGAGGGCCATGG

Product: HAD family hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Hydrolase; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Domain Protein Hydrolase; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPRASVATQLDDFGIPRDCWDVI
ATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVADAVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTR
RLKLLCANPDIVVDRGESREWCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG
GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR

Sequences:

>Translated_290_residues
MTRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPRASVATQLDDFGIPRDCWDVI
ATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVADAVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTR
RLKLLCANPDIVVDRGESREWCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG
GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR
>Mature_289_residues
TRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPRASVATQLDDFGIPRDCWDVIA
TSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVADAVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTRR
LKLLCANPDIVVDRGESREWCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPGG
IGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31375; Mature: 31244

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
ASVATQLDDFGIPRDCWDVIATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVAD
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHH
AVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTRRLKLLCANPDIVVDRGESRE
HHHHHCCCHHHCCCEEEECCCCCCCCHHHHCHHHHHHHHHEEEEEECCCCEEEECCCCHH
WCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG
HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR
CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRIVESLAEISDLYDAVFCDLWGCVHDGITAFDEAIEALRAFKAKGGTVLLLTNAPRPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
ASVATQLDDFGIPRDCWDVIATSGDSARAAMLSGAVGTKVWHIGEPEHAPFFAPMDLVAD
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHCEEEECCCCCCCCCCCCHHHHHH
AVDVTRVPLDEAEGIVCTGPFDPKADPSELRPQFLLAKTRRLKLLCANPDIVVDRGESRE
HHHHHCCCHHHCCCEEEECCCCCCCCHHHHCHHHHHHHHHEEEEEECCCCEEEECCCCHH
WCAGALAKLYTEMGGESLYFGKPHPPIYDLARRRLVQMGKPTPDDRILAIGDGIVTDVPG
HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
GIGENIDTLFITGGLARDETGTDHQPDPAKLARFLTDAQLEPTYSVGMLR
CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA