| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ppaC [H]
Identifier: 89055852
GI number: 89055852
Start: 3413847
End: 3414770
Strand: Direct
Name: ppaC [H]
Synonym: Jann_3361
Alternate gene names: 89055852
Gene position: 3413847-3414770 (Clockwise)
Preceding gene: 89055851
Following gene: 89055853
Centisome position: 79.06
GC content: 59.85
Gene sequence:
>924_bases ATGACCACATTGGTTTTCGGCCACAAATCCCCCGACACCGATTCCACAGGCTCGCCGCTGATTTGGGCGTGGTATCTGAC CGAGGTCAAAGGCGTCCCGGCAGAGGCCGTGTTGCTGGGCGAGCCCAACACCGAAGCGGCTTTCGTGTTGGACCGCTGGG ACCTGCCCAATCCCCGGATCATCGATAAGATAGAAGCCGGTCAATCCGTCGTCATCGTCGACACCAACAACCCGTCAGAG CTGCCCGAGGCGATCAACGACGCGGATATCCAGGGGATCATCGACCACCACAAACTGGTGGGCGGGCTGGAGACGAAGGG CCCCATCGACATCCGCATTGAACCGCTCGCCTGCACGGCCACGATCATGCACAAGATGATCGGCGATGACCTGTCGCAAG CGCCCACCAACATCAAAGGCGCCATGCTGAGCTGCATCCTATCGGACACGCTGGAATTCCGCTCTCCAACGACCACCCAG GAAGATCGCGCCGTTGCCGAGGCGCTGGCCGCCGACCTCGACATCAACATCCCCGACTACGCCGCTGAGATGTTCGCGGC CAAATCCGATGTATCCCGTTTCTCAGATGCAGAGCTTCTGAGGATGGACAGCAAGACATATGAGGTGAGCGGAAAGACCT TCCGTGTCTCCGTGCTGGAGACGACGTCCCCCGCCACCGTGCTGTCGCGCAAGGACAGCCTGATGGAAACGATGCCAACA GTCGCGACCGAGGACGGTGCGGATCAGGTGCTTCTGTTCGTGATCGACATCCTGCAGGAAGAAGCGACCTTGCTGGTTCC AAATGATCTGGTGAAGACGGTCGCGGAGAAGAGTTTCTCGACCGTCGCCAGTGACGGCGATCTGCTGGTCCTGCCCGGTA TCGTCAGCCGCAAGAAGCAGATTATCCCCAACCTCACCGTCTGA
Upstream 100 bases:
>100_bases CGTTGTCCAATGCAGAGAAATCCTGCGCCACGCCCGTGACATCAACAATCACCAAAGGTAGAAGGGCGCCAAATTTGACA GATCTAGCAAGGTACGCCCC
Downstream 100 bases:
>100_bases AGTCACGCGGCAGGGCAGGTATCCCCGCCTTGTCGTGACGCCCCAACTGGCGCGTTACTGTGGTACCGCGTTTCGCGACA GTTGGAGGTTCCCTTGCGCT
Product: putative manganese-dependent inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRIIDKIEAGQSVVIVDTNNPSE LPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTATIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQ EDRAVAEALAADLDINIPDYAAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQIIPNLTV
Sequences:
>Translated_307_residues MTTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRIIDKIEAGQSVVIVDTNNPSE LPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTATIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQ EDRAVAEALAADLDINIPDYAAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQIIPNLTV >Mature_306_residues TTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRIIDKIEAGQSVVIVDTNNPSEL PEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTATIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQE DRAVAEALAADLDINIPDYAAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPTV ATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQIIPNLTV
Specific function: Unknown
COG id: COG1227
COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase class C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004097 - InterPro: IPR022934 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02833 DHHA2 [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 33217; Mature: 33086
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRI CCEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCE IDKIEAGQSVVIVDTNNPSELPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTA EHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHH TIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQEDRAVAEALAADLDINIPDY HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH AAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT HHHHHHHHHHHHHCCCCHHEEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCC VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQ CCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH IIPNLTV CCCCCCC >Mature Secondary Structure TTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRI CEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCE IDKIEAGQSVVIVDTNNPSELPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTA EHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHH TIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQEDRAVAEALAADLDINIPDY HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH AAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT HHHHHHHHHHHHHCCCCHHEEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCC VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQ CCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH IIPNLTV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA