| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89055301
Identifier: 89055301
GI number: 89055301
Start: 2824772
End: 2825782
Strand: Reverse
Name: 89055301
Synonym: Jann_2810
Alternate gene names: NA
Gene position: 2825782-2824772 (Counterclockwise)
Preceding gene: 89055302
Following gene: 89055299
Centisome position: 65.44
GC content: 56.87
Gene sequence:
>1011_bases ATGACGGACATGGAGCTTGCGCGCATTGAGCGCTGGCTGGAGGTGAATGTCGGTCTGCAAGGCACGGTAACCGCACGTAA ATTCGCGAATGGGCAATCCAACCCGACCTACCTGCTGGATGTTGGGGGCAACCAACTTGTGCTACGCCGCAAACCGCCGG GTCTTCTCCTGAAATCGGCCCATGCGGTGGATCGGGAGTTTCGGGTGCAAAAGGCGCTTGAGGGAACCAGGGTGCCCGTG GCGCGGATGGTGGCCTTTTGTGAGGACGAGGCGGTCATCGGATCGGCCTTTTACGTGATGGAGCATGTTGAGGGGCGATG CGTCGACGATCCACGTTTGCCTGACATCTCAAGGGATAGAAAGAATATATATTTCAATGAGATGGGTCGCGTCCTCGCAG ATATCCACAGTGTCGATCTGGAGGCCGTCGGCCTGTCGGATTACGGCCCGACAGGCAATTATTACAGGCGTCAGATAGAT CGCTGGACGTCGCAATATCACGCCAGTGCGACAGGTGAGATCAGCGCCATGGATCAGCTGATGGTCATTCTGGATCGGAC CTGCCCAAAGGACGATGGGTTGGTCAGCCTAGTCCATGGCGATTACCGGATCGACAATTTGATGTTCGCGCCGGACGCAG CGGAGATAAAAGCGGTGCTGGATTGGGAGCTTTCGACCCTCGGTCATCCCTTTGCCGACATCGCGGGCGTTATAATGCAG TGGCAAATGCCCCCCGGCGAACAAGGGCGGGGACTTCGCGGCGTCGACCGCGGGATCGAGGGATTGCCAAGTGATGACGA CTTTGTTGCCGCTTATTGTGAGCGAATGGGGATCGGGCAAATCGACAATTTTGGTTTTTATGTGGGGTTTTGCTTCTTCC GAATGGCCGCGATCCTGCAGGGTGTGAAAAAGCGCGCTATTGATGGAAATGCATCTGATCCGGAGCGTGGCCTAAGGTTG GGCGCATTCGTTCCACTGTACGCGGAGGCCGGGTTGGAGGCCCTTGGATAA
Upstream 100 bases:
>100_bases GGGCGGATCTGAGGACTTTGCGCCTTGCGGATGGTCCGGACGCTGTCCATCGCAGGCAGGTCGCCCGTGCCGAGCTGCGC AAACATACCAATACCTCCCA
Downstream 100 bases:
>100_bases GTTCGGGTTATCCACAACCCGATATCGTCCGTTCCGGCAAACGAAATATTATGAATCGAATGCCTCTCTACAGAATTTTT TATCTTATCCACAGAAAACT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTDMELARIERWLEVNVGLQGTVTARKFANGQSNPTYLLDVGGNQLVLRRKPPGLLLKSAHAVDREFRVQKALEGTRVPV ARMVAFCEDEAVIGSAFYVMEHVEGRCVDDPRLPDISRDRKNIYFNEMGRVLADIHSVDLEAVGLSDYGPTGNYYRRQID RWTSQYHASATGEISAMDQLMVILDRTCPKDDGLVSLVHGDYRIDNLMFAPDAAEIKAVLDWELSTLGHPFADIAGVIMQ WQMPPGEQGRGLRGVDRGIEGLPSDDDFVAAYCERMGIGQIDNFGFYVGFCFFRMAAILQGVKKRAIDGNASDPERGLRL GAFVPLYAEAGLEALG
Sequences:
>Translated_336_residues MTDMELARIERWLEVNVGLQGTVTARKFANGQSNPTYLLDVGGNQLVLRRKPPGLLLKSAHAVDREFRVQKALEGTRVPV ARMVAFCEDEAVIGSAFYVMEHVEGRCVDDPRLPDISRDRKNIYFNEMGRVLADIHSVDLEAVGLSDYGPTGNYYRRQID RWTSQYHASATGEISAMDQLMVILDRTCPKDDGLVSLVHGDYRIDNLMFAPDAAEIKAVLDWELSTLGHPFADIAGVIMQ WQMPPGEQGRGLRGVDRGIEGLPSDDDFVAAYCERMGIGQIDNFGFYVGFCFFRMAAILQGVKKRAIDGNASDPERGLRL GAFVPLYAEAGLEALG >Mature_335_residues TDMELARIERWLEVNVGLQGTVTARKFANGQSNPTYLLDVGGNQLVLRRKPPGLLLKSAHAVDREFRVQKALEGTRVPVA RMVAFCEDEAVIGSAFYVMEHVEGRCVDDPRLPDISRDRKNIYFNEMGRVLADIHSVDLEAVGLSDYGPTGNYYRRQIDR WTSQYHASATGEISAMDQLMVILDRTCPKDDGLVSLVHGDYRIDNLMFAPDAAEIKAVLDWELSTLGHPFADIAGVIMQW QMPPGEQGRGLRGVDRGIEGLPSDDDFVAAYCERMGIGQIDNFGFYVGFCFFRMAAILQGVKKRAIDGNASDPERGLRLG AFVPLYAEAGLEALG
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=328, Percent_Identity=44.2073170731707, Blast_Score=279, Evalue=2e-75, Organism=Homo sapiens, GI48976061, Length=328, Percent_Identity=44.2073170731707, Blast_Score=279, Evalue=3e-75, Organism=Homo sapiens, GI38505218, Length=319, Percent_Identity=39.4984326018809, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17562446, Length=322, Percent_Identity=38.1987577639752, Blast_Score=216, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37237; Mature: 37106
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDMELARIERWLEVNVGLQGTVTARKFANGQSNPTYLLDVGGNQLVLRRKPPGLLLKSA CCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEHHH HAVDREFRVQKALEGTRVPVARMVAFCEDEAVIGSAFYVMEHVEGRCVDDPRLPDISRDR HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KNIYFNEMGRVLADIHSVDLEAVGLSDYGPTGNYYRRQIDRWTSQYHASATGEISAMDQL HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH MVILDRTCPKDDGLVSLVHGDYRIDNLMFAPDAAEIKAVLDWELSTLGHPFADIAGVIMQ HHHHHCCCCCCCCEEEEEECCEEECCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHE WQMPPGEQGRGLRGVDRGIEGLPSDDDFVAAYCERMGIGQIDNFGFYVGFCFFRMAAILQ ECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GVKKRAIDGNASDPERGLRLGAFVPLYAEAGLEALG HHHHHHCCCCCCCHHHCCEECCCHHHHHHCCHHHCC >Mature Secondary Structure TDMELARIERWLEVNVGLQGTVTARKFANGQSNPTYLLDVGGNQLVLRRKPPGLLLKSA CCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEHHH HAVDREFRVQKALEGTRVPVARMVAFCEDEAVIGSAFYVMEHVEGRCVDDPRLPDISRDR HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KNIYFNEMGRVLADIHSVDLEAVGLSDYGPTGNYYRRQIDRWTSQYHASATGEISAMDQL HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH MVILDRTCPKDDGLVSLVHGDYRIDNLMFAPDAAEIKAVLDWELSTLGHPFADIAGVIMQ HHHHHCCCCCCCCEEEEEECCEEECCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHE WQMPPGEQGRGLRGVDRGIEGLPSDDDFVAAYCERMGIGQIDNFGFYVGFCFFRMAAILQ ECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GVKKRAIDGNASDPERGLRLGAFVPLYAEAGLEALG HHHHHHCCCCCCCHHHCCEECCCHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA