| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055249
Identifier: 89055249
GI number: 89055249
Start: 2772594
End: 2772932
Strand: Reverse
Name: 89055249
Synonym: Jann_2758
Alternate gene names: NA
Gene position: 2772932-2772594 (Counterclockwise)
Preceding gene: 89055250
Following gene: 89055248
Centisome position: 64.22
GC content: 63.13
Gene sequence:
>339_bases ATGACCGGTTTGGCCACTGCCCATGGCGTGATCTCCGCATTGCGTCGGGCCTCTCGACAGCCGAGGGCGCGCATGGCCAC AGCCCCCGGGATATTGATTTGGCTTGGAAGGCGTCTTTGGTCCGCCACCGTCCGGGCCACGGCCCACTGCGCCGGCGTCA TACCCACCGCGTTCAGCATTTTCAGCGGTCAAACCATCGCCAGTGCAAAGCGCGCTAGCCCTGAAGGTGCCCTTCTAACA TCTTCCAATATGGGTCTGGAAACAGGCCGGGCCGCACTGGCCCCGCTGCTCGGACGAGTGTTGCACACCTGCGCCAATCA GGAAGAGGAGCCGACATGA
Upstream 100 bases:
>100_bases ATCTCGGCCTGGGCCAATGGATTGCCCGCCCGTCTGTCTGACCTCGACAAAACGGCTGCCACGGGATGAGCGGCGCGCGC ACCATTAAAGGACATCCCCG
Downstream 100 bases:
>100_bases GCCTTGCCCTGACCCTCGCATGCCTATGGGTGCTGGCCTCGGCCATCGTTGCGATGCTGCCGCTACGGTTCCATTGGCGC TTTGGTCTGCCGCTTCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTGLATAHGVISALRRASRQPRARMATAPGILIWLGRRLWSATVRATAHCAGVIPTAFSIFSGQTIASAKRASPEGALLT SSNMGLETGRAALAPLLGRVLHTCANQEEEPT
Sequences:
>Translated_112_residues MTGLATAHGVISALRRASRQPRARMATAPGILIWLGRRLWSATVRATAHCAGVIPTAFSIFSGQTIASAKRASPEGALLT SSNMGLETGRAALAPLLGRVLHTCANQEEEPT >Mature_111_residues TGLATAHGVISALRRASRQPRARMATAPGILIWLGRRLWSATVRATAHCAGVIPTAFSIFSGQTIASAKRASPEGALLTS SNMGLETGRAALAPLLGRVLHTCANQEEEPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11705; Mature: 11573
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLATAHGVISALRRASRQPRARMATAPGILIWLGRRLWSATVRATAHCAGVIPTAFSI CCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGQTIASAKRASPEGALLTSSNMGLETGRAALAPLLGRVLHTCANQEEEPT HCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TGLATAHGVISALRRASRQPRARMATAPGILIWLGRRLWSATVRATAHCAGVIPTAFSI CCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGQTIASAKRASPEGALLTSSNMGLETGRAALAPLLGRVLHTCANQEEEPT HCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA