| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055248
Identifier: 89055248
GI number: 89055248
Start: 2772355
End: 2772597
Strand: Reverse
Name: 89055248
Synonym: Jann_2757
Alternate gene names: NA
Gene position: 2772597-2772355 (Counterclockwise)
Preceding gene: 89055249
Following gene: 89055247
Centisome position: 64.21
GC content: 59.26
Gene sequence:
>243_bases ATGAGCCTTGCCCTGACCCTCGCATGCCTATGGGTGCTGGCCTCGGCCATCGTTGCGATGCTGCCGCTACGGTTCCATTG GCGCTTTGGTCTGCCGCTTCTGATCCTGTCGATCCCGCTCACCATTTTCGTGGGATACGCCCATGGTTGGATCTGGACGG TCGTGATCTTGCTGGCCGTGGGGTCGATGTATCGCAACCCGCTGCGGTATTTTTTGAAACGCGCGTTGGGAAGGGCCGTT TGA
Upstream 100 bases:
>100_bases TAACATCTTCCAATATGGGTCTGGAAACAGGCCGGGCCGCACTGGCCCCGCTGCTCGGACGAGTGTTGCACACCTGCGCC AATCAGGAAGAGGAGCCGAC
Downstream 100 bases:
>100_bases TGCCAGGATCTCTCATTCTTGCCTGCCTGTGGGCGCTGGTTGCCTGTTGCGCTGGTATGGCGCCGCGTCGGGTGCACATT CCCGCCGCGTGGGTCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSLALTLACLWVLASAIVAMLPLRFHWRFGLPLLILSIPLTIFVGYAHGWIWTVVILLAVGSMYRNPLRYFLKRALGRAV
Sequences:
>Translated_80_residues MSLALTLACLWVLASAIVAMLPLRFHWRFGLPLLILSIPLTIFVGYAHGWIWTVVILLAVGSMYRNPLRYFLKRALGRAV >Mature_79_residues SLALTLACLWVLASAIVAMLPLRFHWRFGLPLLILSIPLTIFVGYAHGWIWTVVILLAVGSMYRNPLRYFLKRALGRAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9053; Mature: 8922
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLALTLACLWVLASAIVAMLPLRFHWRFGLPLLILSIPLTIFVGYAHGWIWTVVILLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSMYRNPLRYFLKRALGRAV HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLALTLACLWVLASAIVAMLPLRFHWRFGLPLLILSIPLTIFVGYAHGWIWTVVILLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSMYRNPLRYFLKRALGRAV HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA