| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sam [H]
Identifier: 89055134
GI number: 89055134
Start: 2656651
End: 2657520
Strand: Direct
Name: sam [H]
Synonym: Jann_2643
Alternate gene names: 89055134
Gene position: 2656651-2657520 (Clockwise)
Preceding gene: 89055133
Following gene: 89055138
Centisome position: 61.53
GC content: 64.6
Gene sequence:
>870_bases GTGAGCAAACTCACCCCGACCACCCAGGGCATCGTGCTGTTCCTGTCGGCGATCTTTCTGTTCTCGGCCATGGACGCCGT GGCCAAGACATTGACGACGCGTTTTGATGTGATGCAGGTGGTCTGGGCGCGGTATGCGGGGCAAATGGTCGTTGTTGCCC TGATCCTCTGGCCCCGCCTGTTCCGATTGATCCGCACGGCGCATCCGGGCCTGCAACTGCTCCGCTCAGCATTGCTCTTT GCGGCAACCTGGTGCTTCTTCACGTCGCTGTCGTTCATGGAGATCGCGTCGGCCACGGCGGTGATGAACATTCACCCGGT GCTGCTCACCCTCGGAGCGGCGCTAGTTTTGGGAGAGCGTCTGGGGGCACGGCGCATCATTGGCATCGCGCTGGCCCTCA CGGGGGCGCTGATCATCCTGCGCCCGGGCACGGAGGTCCTGTCGTGGTCCGCGCTTCTGCCGCTGGCGGCGGGGTTCTGC TATGCGTCCTACGCGCTGACCACCCGGTTTTTGGGCCGGGATGAGCCGATTCTGACGTCGTTCCTCTATACCGCCATCAT CGGGACCGTCGCCGCCTCGGCCCTTGTGGTGCCCGTGTGGGACGCGCCCGCGCCCACCGATTGGGCGATTTTTCTTGGTA TCGGGATCCTGGGGGCCGCCGGGCAGTTTCTGTTTATCCGCGCGATGATTGTGGCCGAGGCCGGGGCGATTGCGCCGTTT GGCTATTCCGGGGTGGTCTTTTCGACGATCTGGGGCCTTGTCGTGTTCTCGGAAGTGCCGGACGGCCCGACGCTCCTCGG GGCGATGGTGATTGTGGGGGCCGGCGTCTATGTCTGGTATCGCGAAAACCGCGCGACCGCGGCCGGTTAG
Upstream 100 bases:
>100_bases TGGATGACATCATCGCGCTGGCCCAATCCCACGGCTACCCGTTCGAACAGCTGCGCCCCGCGTTGGAGGCCGCCGCCGCC CGCAACACATCAACCGCTGA
Downstream 100 bases:
>100_bases ACGCGGTCCGGGCCTCAGTCGAGCCGGGCGGCTCCCAGGATCGCGCCGTGACCATCGGTCTGCACGATCACCACATGGGC CATATCGGCGACGGGCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRLFRLIRTAHPGLQLLRSALLF AATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGERLGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFC YASYALTTRFLGRDEPILTSFLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG
Sequences:
>Translated_289_residues MSKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRLFRLIRTAHPGLQLLRSALLF AATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGERLGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFC YASYALTTRFLGRDEPILTSFLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG >Mature_288_residues SKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRLFRLIRTAHPGLQLLRSALLFA ATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGERLGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFCY ASYALTTRFLGRDEPILTSFLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPFG YSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30832; Mature: 30701
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FRLIRTAHPGLQLLRSALLFAATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGER HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFCYASYALTTRFLGRDEPILTS HCHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF HHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC >Mature Secondary Structure SKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FRLIRTAHPGLQLLRSALLFAATWCFFTSLSFMEIASATAVMNIHPVLLTLGAALVLGER HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFCYASYALTTRFLGRDEPILTS HCHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEAGAIAPF HHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC GYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRATAAG CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA