| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055133
Identifier: 89055133
GI number: 89055133
Start: 2656211
End: 2656654
Strand: Direct
Name: 89055133
Synonym: Jann_2642
Alternate gene names: NA
Gene position: 2656211-2656654 (Clockwise)
Preceding gene: 89055132
Following gene: 89055134
Centisome position: 61.52
GC content: 64.19
Gene sequence:
>444_bases ATGGATCTTCGCCAGATTACCGAGACCTATTCCGTCACCCCCCAGATCGAACCGTCCGACGTCGCCACCCTTGCGGCGAT GGGCGTCAAGACGCTGATCTGCAACCGGCCCGACATCGAAAATCCGCCCGCCCTGCAAGCCGCCGCCATCCAGGCACAGG CCGACGCTCACGGGATCGACTTTGTTTTCAATCCTTTCCAGGCCCAGACCCTGAGCCAAGACCATGTGGATGAACAACTC GACGCCCTGACCGATGCAGAGGGGCCGGTGGTGGGCTATTGCGCCTCGGGCAACCGCTGCACGATTGTCTGGGCATTGGG GGCCGCGGGCCATGTGCCGGTGGATGACATCATCGCGCTGGCCCAATCCCACGGCTACCCGTTCGAACAGCTGCGCCCCG CGTTGGAGGCCGCCGCCGCCCGCAACACATCAACCGCTGAGTGA
Upstream 100 bases:
>100_bases GCTCTGCCGTCCTGACCACTGGCCTTCTTGACCACTGGTCCTTCCCGCGCGATTGCGGCAAGTTGCGCGAAACCACCAGC AACCCCCGGGACACGCCCCC
Downstream 100 bases:
>100_bases GCAAACTCACCCCGACCACCCAGGGCATCGTGCTGTTCCTGTCGGCGATCTTTCTGTTCTCGGCCATGGACGCCGTGGCC AAGACATTGACGACGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGIDFVFNPFQAQTLSQDHVDEQL DALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIALAQSHGYPFEQLRPALEAAAARNTSTAE
Sequences:
>Translated_147_residues MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGIDFVFNPFQAQTLSQDHVDEQL DALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIALAQSHGYPFEQLRPALEAAAARNTSTAE >Mature_147_residues MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGIDFVFNPFQAQTLSQDHVDEQL DALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIALAQSHGYPFEQLRPALEAAAARNTSTAE
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15583; Mature: 15583
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGID CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC FVFNPFQAQTLSQDHVDEQLDALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIAL EEECCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHH AQSHGYPFEQLRPALEAAAARNTSTAE HHHCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGID CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC FVFNPFQAQTLSQDHVDEQLDALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIAL EEECCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHH AQSHGYPFEQLRPALEAAAARNTSTAE HHHCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA