Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055133

Identifier: 89055133

GI number: 89055133

Start: 2656211

End: 2656654

Strand: Direct

Name: 89055133

Synonym: Jann_2642

Alternate gene names: NA

Gene position: 2656211-2656654 (Clockwise)

Preceding gene: 89055132

Following gene: 89055134

Centisome position: 61.52

GC content: 64.19

Gene sequence:

>444_bases
ATGGATCTTCGCCAGATTACCGAGACCTATTCCGTCACCCCCCAGATCGAACCGTCCGACGTCGCCACCCTTGCGGCGAT
GGGCGTCAAGACGCTGATCTGCAACCGGCCCGACATCGAAAATCCGCCCGCCCTGCAAGCCGCCGCCATCCAGGCACAGG
CCGACGCTCACGGGATCGACTTTGTTTTCAATCCTTTCCAGGCCCAGACCCTGAGCCAAGACCATGTGGATGAACAACTC
GACGCCCTGACCGATGCAGAGGGGCCGGTGGTGGGCTATTGCGCCTCGGGCAACCGCTGCACGATTGTCTGGGCATTGGG
GGCCGCGGGCCATGTGCCGGTGGATGACATCATCGCGCTGGCCCAATCCCACGGCTACCCGTTCGAACAGCTGCGCCCCG
CGTTGGAGGCCGCCGCCGCCCGCAACACATCAACCGCTGAGTGA

Upstream 100 bases:

>100_bases
GCTCTGCCGTCCTGACCACTGGCCTTCTTGACCACTGGTCCTTCCCGCGCGATTGCGGCAAGTTGCGCGAAACCACCAGC
AACCCCCGGGACACGCCCCC

Downstream 100 bases:

>100_bases
GCAAACTCACCCCGACCACCCAGGGCATCGTGCTGTTCCTGTCGGCGATCTTTCTGTTCTCGGCCATGGACGCCGTGGCC
AAGACATTGACGACGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGIDFVFNPFQAQTLSQDHVDEQL
DALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIALAQSHGYPFEQLRPALEAAAARNTSTAE

Sequences:

>Translated_147_residues
MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGIDFVFNPFQAQTLSQDHVDEQL
DALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIALAQSHGYPFEQLRPALEAAAARNTSTAE
>Mature_147_residues
MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGIDFVFNPFQAQTLSQDHVDEQL
DALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIALAQSHGYPFEQLRPALEAAAARNTSTAE

Specific function: Unknown

COG id: COG3453

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15583; Mature: 15583

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGID
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
FVFNPFQAQTLSQDHVDEQLDALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIAL
EEECCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHH
AQSHGYPFEQLRPALEAAAARNTSTAE
HHHCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDLRQITETYSVTPQIEPSDVATLAAMGVKTLICNRPDIENPPALQAAAIQAQADAHGID
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
FVFNPFQAQTLSQDHVDEQLDALTDAEGPVVGYCASGNRCTIVWALGAAGHVPVDDIIAL
EEECCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHH
AQSHGYPFEQLRPALEAAAARNTSTAE
HHHCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA