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The map label for this gene is insD1 [C]

Identifier: 89055115

GI number: 89055115

Start: 2641907

End: 2642620

Strand: Direct

Name: insD1 [C]

Synonym: Jann_2624

Alternate gene names: 89055115

Gene position: 2641907-2642620 (Clockwise)

Preceding gene: 89055114

Following gene: 89055116

Centisome position: 61.18

GC content: 60.78

Gene sequence:

>714_bases
ATGAAGACCAAGAGTTACAATCAGAAACGGGCCTGTTCCTTGGCCGGGATCGATCCGCGTGTGTATCGGCGAAGGTCGAA
CCGCCCCGCCGACACGGAATTGCGGGCCCGGATGAAGGAGCTGGCATCCGAGCGGCGACGGTTCGGATATCGCCGTCTGC
ATATCCTACTGAAGCGAGAAGGCTGGGAGGTGAACTGGAAGAAGCTGTATCGGCTCTACCGCGAAGAAGGGTTAACCGTC
CATAAACGGGGCGGGCGCAAGCGTGCTGTGGGCACGAGGACGCCCATGGCGATCCCGCAGGGGCCGAACCAGCGATGGTC
GCTCGACTTCATGTCTGACGCGCTGGAGGATGGCCGCAGGTTCCGCGTGCTGAATGTCATCGACGACTTCAGGCGGGAAT
GTCTGGCCGCCGTGGTGGACACATCCATAGGTGGGGCACGCGTCGCCCGCGAACTGGATCGTATCGCTGAACTGCGCGGC
TACCCCTGCATGGTGGTAAGCGACAACGGCACCGAATTGACCAGCAATGCGATGCTGAAATGGCAGGAGGACCGCAAGGT
CGGTTGGCACTACATCGCGCCTGGAAAGCCCATGCAGAACGGCCTGGTCGAAAGCTTCAATGGAAGGATGCGCGAGGAAT
GCCTCAACGAACACCTGTTCCCGTCTCTGCGCCATGCCGTCGTCCATCGTCCTCGGACCAATGGCGGAAAATGA

Upstream 100 bases:

>100_bases
AGATGCTGGCCGAGCAGATGATGGATGTGGCGACGCTGAAAGAGATGCTCGGAAAAAACTTCTGAGGCCCGGTTCGAGGA
GGAATGCTGTGAACTGGGCC

Downstream 100 bases:

>100_bases
ACGACCATGATCGCGGCATGGCGCGCCGACTACAATCAAAACCGGCCTCACTCCAGCCTCGCTGGCCTGACGCCACACGA
ATATGCTAACCGGTCAAAGG

Product: integrase protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKTKSYNQKRACSLAGIDPRVYRRRSNRPADTELRARMKELASERRRFGYRRLHILLKREGWEVNWKKLYRLYREEGLTV
HKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFRRECLAAVVDTSIGGARVARELDRIAELRG
YPCMVVSDNGTELTSNAMLKWQEDRKVGWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHAVVHRPRTNGGK

Sequences:

>Translated_237_residues
MKTKSYNQKRACSLAGIDPRVYRRRSNRPADTELRARMKELASERRRFGYRRLHILLKREGWEVNWKKLYRLYREEGLTV
HKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFRRECLAAVVDTSIGGARVARELDRIAELRG
YPCMVVSDNGTELTSNAMLKWQEDRKVGWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHAVVHRPRTNGGK
>Mature_237_residues
MKTKSYNQKRACSLAGIDPRVYRRRSNRPADTELRARMKELASERRRFGYRRLHILLKREGWEVNWKKLYRLYREEGLTV
HKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFRRECLAAVVDTSIGGARVARELDRIAELRG
YPCMVVSDNGTELTSNAMLKWQEDRKVGWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHAVVHRPRTNGGK

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27621; Mature: 27621

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKSYNQKRACSLAGIDPRVYRRRSNRPADTELRARMKELASERRRFGYRRLHILLKRE
CCCCCCCCHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GWEVNWKKLYRLYREEGLTVHKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRR
CCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCE
FRVLNVIDDFRRECLAAVVDTSIGGARVARELDRIAELRGYPCMVVSDNGTELTSNAMLK
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCHHEE
WQEDRKVGWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHAVVHRPRTNGGK
ECCCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKTKSYNQKRACSLAGIDPRVYRRRSNRPADTELRARMKELASERRRFGYRRLHILLKRE
CCCCCCCCHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GWEVNWKKLYRLYREEGLTVHKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRR
CCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCE
FRVLNVIDDFRRECLAAVVDTSIGGARVARELDRIAELRGYPCMVVSDNGTELTSNAMLK
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCHHEE
WQEDRKVGWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHAVVHRPRTNGGK
ECCCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]