| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055114
Identifier: 89055114
GI number: 89055114
Start: 2641605
End: 2641799
Strand: Direct
Name: 89055114
Synonym: Jann_2623
Alternate gene names: NA
Gene position: 2641605-2641799 (Clockwise)
Preceding gene: 89055113
Following gene: 89055115
Centisome position: 61.18
GC content: 56.41
Gene sequence:
>195_bases ATGAAGAGAAGCCGTTTCAGCGAAGAACAGATCATTGGCGTTTTGAAAGAGCACCAGGCTGGCCTGGGTGCGAAGGATCT GTGCCGCAAGCATGGGATCAGTGACGCGACCTTCTACAAGTGGCGATCCAAGTATGGCGGCATGGAGGTGTCCGGCGCTC GGCGGCTGAAGACGCTGGAATCTGAGAACGCCTAA
Upstream 100 bases:
>100_bases TCGCTGACGCCTACCGCCACATGGCGTCCAACACCTGACCTGCTCCCCTGAAATGTCCGGCATTTAGAGTTAGCCTGTTC TCCAACTGAGGAGACAGACG
Downstream 100 bases:
>100_bases CTGAAGAAGATGCTGGCCGAGCAGATGATGGATGTGGCGACGCTGAAAGAGATGCTCGGAAAAAACTTCTGAGGCCCGGT TCGAGGAGGAATGCTGTGAA
Product: transposase IS3/IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MKRSRFSEEQIIGVLKEHQAGLGAKDLCRKHGISDATFYKWRSKYGGMEVSGARRLKTLESENA
Sequences:
>Translated_64_residues MKRSRFSEEQIIGVLKEHQAGLGAKDLCRKHGISDATFYKWRSKYGGMEVSGARRLKTLESENA >Mature_64_residues MKRSRFSEEQIIGVLKEHQAGLGAKDLCRKHGISDATFYKWRSKYGGMEVSGARRLKTLESENA
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 7257; Mature: 7257
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSRFSEEQIIGVLKEHQAGLGAKDLCRKHGISDATFYKWRSKYGGMEVSGARRLKTLE CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHC SENA CCCC >Mature Secondary Structure MKRSRFSEEQIIGVLKEHQAGLGAKDLCRKHGISDATFYKWRSKYGGMEVSGARRLKTLE CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHC SENA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2544911 [H]