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The map label for this gene is rhaM

Identifier: 89055089

GI number: 89055089

Start: 2611327

End: 2611641

Strand: Direct

Name: rhaM

Synonym: Jann_2598

Alternate gene names: 89055089

Gene position: 2611327-2611641 (Clockwise)

Preceding gene: 89055088

Following gene: 89055090

Centisome position: 60.48

GC content: 58.73

Gene sequence:

>315_bases
ATGGAGAAATACGCCTTCAAGATGCAGCTCACGCCCGGGTGCCTTGCCGAATACCGCAAGCGCCATGACGAGATCTGGCC
AGAGCTGGTGGATCTGCTGCACCAGGCAGGCGTCAGCGATTACTCGATCCATCTGGATGAGGAGACCGGCATCTTGTTCG
GCGTCCTCTGGCGGACGGCGGATCACAGCATGGATGCCCTGCCCGATCATCCTGTGATGCAACGATGGTGGGCGCATATG
GCCGATATCATGGAGACGCATCCGGACAATGAACCCAAAGCCGTCCCCCTTACCCCCGTCTTCCATATGCCATGA

Upstream 100 bases:

>100_bases
TGCCCGGCATCGTGATGTCCATTTTCATCGGCTGCCTATTGATCGGTGTGATCGCCCTGCCCCGGCTCTGGTCCCAATTT
CAACACGCCCGGAGGAGATG

Downstream 100 bases:

>100_bases
CCCATATCGCCGTCATCGACATCGGTAAGACCAACGCCAAACTGGCGCTGGTGGATGGCGAGACCCTGGCCGAACGTGCC
GTTGTCACCCGCCCCAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Rhamnose 1-epimerase; Type-3 mutarotase

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEKYAFKMQLTPGCLAEYRKRHDEIWPELVDLLHQAGVSDYSIHLDEETGILFGVLWRTADHSMDALPDHPVMQRWWAHM
ADIMETHPDNEPKAVPLTPVFHMP

Sequences:

>Translated_104_residues
MEKYAFKMQLTPGCLAEYRKRHDEIWPELVDLLHQAGVSDYSIHLDEETGILFGVLWRTADHSMDALPDHPVMQRWWAHM
ADIMETHPDNEPKAVPLTPVFHMP
>Mature_104_residues
MEKYAFKMQLTPGCLAEYRKRHDEIWPELVDLLHQAGVSDYSIHLDEETGILFGVLWRTADHSMDALPDHPVMQRWWAHM
ADIMETHPDNEPKAVPLTPVFHMP

Specific function: Involved in the anomeric conversion of L-rhamnose

COG id: COG3254

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose mutarotase family

Homologues:

Organism=Escherichia coli, GI1790335, Length=104, Percent_Identity=38.4615384615385, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHAM_JANSC (Q28P47)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_510540.1
- ProteinModelPortal:   Q28P47
- SMR:   Q28P47
- STRING:   Q28P47
- GeneID:   3935061
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_2598
- eggNOG:   COG3254
- HOGENOM:   HBG649684
- OMA:   DEYEKRH
- PhylomeDB:   Q28P47
- BioCyc:   JSP290400:JANN_2598-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01663
- InterPro:   IPR013448
- InterPro:   IPR008000
- TIGRFAMs:   TIGR02625

Pfam domain/function: PF05336 DUF718

EC number: NA

Molecular weight: Translated: 12134; Mature: 12134

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: ACT_SITE 22-22 BINDING 18-18 BINDING 41-41

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYAFKMQLTPGCLAEYRKRHDEIWPELVDLLHQAGVSDYSIHLDEETGILFGVLWRTA
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHC
DHSMDALPDHPVMQRWWAHMADIMETHPDNEPKAVPLTPVFHMP
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKYAFKMQLTPGCLAEYRKRHDEIWPELVDLLHQAGVSDYSIHLDEETGILFGVLWRTA
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHC
DHSMDALPDHPVMQRWWAHMADIMETHPDNEPKAVPLTPVFHMP
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA