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The map label for this gene is lyx [C]

Identifier: 89055090

GI number: 89055090

Start: 2611638

End: 2613008

Strand: Direct

Name: lyx [C]

Synonym: Jann_2599

Alternate gene names: 89055090

Gene position: 2611638-2613008 (Clockwise)

Preceding gene: 89055089

Following gene: 89055091

Centisome position: 60.48

GC content: 65.5

Gene sequence:

>1371_bases
ATGACCCATATCGCCGTCATCGACATCGGTAAGACCAACGCCAAACTGGCGCTGGTGGATGGCGAGACCCTGGCCGAACG
TGCCGTTGTCACCCGCCCCAATACCGTGCGCCCCGGCCCGCCCTGGCCGCATTTTGACCTGGAGGGGCATTGGCGGTTTC
TGCTGGACAACCTCGCGGCATTTCACAAGCGGTACGGTGTCGACGCGATCTCCATCACCGCCCATGGGGCATCTTGTGTG
CTGCTGGACAAAGACGGCAGGTTGGCCGCGCCGATGTTGGATTATGAGCATACCGGCCCCGATGATCTGGCGTCCGAGTA
CGACCAGATCCGCCCTGACTTTGCGAAGACCGGGTCCGCCCGCCTTGCCGGGGGGCTGAATGTGGGCGCGCAACTGCATT
GGATGTTTGCGCACGACCCGGATCTGCACGCCCGCACGGCGCAGATCCTGACCTATCCGCAATACTGGGCCTACCGCCTG
ACCGGCGTGCCCGCGACCGAACGCACATCGTTGGGATGCCACACCGACTTGTGGGAACCTGACGCGGATCATGTCTCGGA
CCTCGCCCACAAACTGGATGTGGCGGACAAGCTGGCCCCCATCTATTTTGCAACGGACGTGCTGGGTGAAGTCACGCCGG
AAGTGTGCCGCCAGACGGGCCTGTCGCCGGACACGCCGGTGACCTGTGGCATCCACGATTCCAACGCCTCGCTCCTGCCG
CATCTGATGACACGGGACGCGCCGTTTTCTGTCGTGTCGACCGGCACCTGGGTCATCGCCATGACCATCGATGGCGCTCC
GGTGGCCCTTGATCCGGCCCGCGACACGCTCTTGAACGTCAACGCTTATGGTGCCCCGGTGCCCTCCGCGCGTTTCATGG
GGGGGCGTGAGTTTGAGGTCATCATGGGCGGATCCTCTGTGCCGCCGACCTCCGCCGACGCTGAGGCGGTGCTGACGCAA
AAGCCCCTGCTGTTGCCCTCTGTCGCGCCCACCACCGGGCCGTTCCAGGGCCGCATCCATGGCTGGACCCCGTCCGAGCC
CGAGGTGGGAACTGGCCTGCGCAGCCTCGTCACGTCCTACTACCTTGCGCTTGTGACGTCAGAATGCCTCACCCTCACCG
GACATCGGGGAGAGATCGTGGTGGAGGGCCCGTTTTCCGAGAACCGGGCCTATCTGGACATGCTGGCCGCCGCGACCGGC
TGTCCGGTGCTCGCCACGGGGACGGCCACGGGCACCAGCCAGGGCGCGGCTTTGCTGGTCACGGGTCCCGCTGTGCTGGC
CCCGCTTGGGGATCGTGTTGATCCTGATGAACTTCGCCCCGAACTGGCCGCCTATGCCAGACACTGGCGGCAGGCCCTCG
ATCCCGCCTGA

Upstream 100 bases:

>100_bases
CTGTGATGCAACGATGGTGGGCGCATATGGCCGATATCATGGAGACGCATCCGGACAATGAACCCAAAGCCGTCCCCCTT
ACCCCCGTCTTCCATATGCC

Downstream 100 bases:

>100_bases
TCTGCTAGCGCGGGAGCAAACCCTGTCGTCCCCGGGCAGGATGTCAGTTTCGCGCCCCCGCGACGGGCCCACCGGCGCAA
CATGTTTAAAATTGAACGGT

Product: carbohydrate kinase

Products: ADP; L-Xylulose 5-Phosphate. [C]

Alternate protein names: Carbohydrate Kinase; L-Fuculokinase; Carbohydrate Kinase Protein; Carbohydrate Kinase Fggy; Sugar Kinase; Pentose Kinase Transmembrane Protein; Carbohydrate Kinase FGGY-Like Protein; Xylulokinase Protein; Erythritol Kinase Protein; L-Xylulose Kinase; Sugar Kinase-Like Protein; Sugar Kinase Protein; Carbohydrate Kinases; Carbohydrate Kinase Fggy-Like Protein; Carbohydrate Kinase Contains FGGY Family Domain; L-Xylulose Kinase Involved In Competition For Nodulation

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MTHIAVIDIGKTNAKLALVDGETLAERAVVTRPNTVRPGPPWPHFDLEGHWRFLLDNLAAFHKRYGVDAISITAHGASCV
LLDKDGRLAAPMLDYEHTGPDDLASEYDQIRPDFAKTGSARLAGGLNVGAQLHWMFAHDPDLHARTAQILTYPQYWAYRL
TGVPATERTSLGCHTDLWEPDADHVSDLAHKLDVADKLAPIYFATDVLGEVTPEVCRQTGLSPDTPVTCGIHDSNASLLP
HLMTRDAPFSVVSTGTWVIAMTIDGAPVALDPARDTLLNVNAYGAPVPSARFMGGREFEVIMGGSSVPPTSADAEAVLTQ
KPLLLPSVAPTTGPFQGRIHGWTPSEPEVGTGLRSLVTSYYLALVTSECLTLTGHRGEIVVEGPFSENRAYLDMLAAATG
CPVLATGTATGTSQGAALLVTGPAVLAPLGDRVDPDELRPELAAYARHWRQALDPA

Sequences:

>Translated_456_residues
MTHIAVIDIGKTNAKLALVDGETLAERAVVTRPNTVRPGPPWPHFDLEGHWRFLLDNLAAFHKRYGVDAISITAHGASCV
LLDKDGRLAAPMLDYEHTGPDDLASEYDQIRPDFAKTGSARLAGGLNVGAQLHWMFAHDPDLHARTAQILTYPQYWAYRL
TGVPATERTSLGCHTDLWEPDADHVSDLAHKLDVADKLAPIYFATDVLGEVTPEVCRQTGLSPDTPVTCGIHDSNASLLP
HLMTRDAPFSVVSTGTWVIAMTIDGAPVALDPARDTLLNVNAYGAPVPSARFMGGREFEVIMGGSSVPPTSADAEAVLTQ
KPLLLPSVAPTTGPFQGRIHGWTPSEPEVGTGLRSLVTSYYLALVTSECLTLTGHRGEIVVEGPFSENRAYLDMLAAATG
CPVLATGTATGTSQGAALLVTGPAVLAPLGDRVDPDELRPELAAYARHWRQALDPA
>Mature_455_residues
THIAVIDIGKTNAKLALVDGETLAERAVVTRPNTVRPGPPWPHFDLEGHWRFLLDNLAAFHKRYGVDAISITAHGASCVL
LDKDGRLAAPMLDYEHTGPDDLASEYDQIRPDFAKTGSARLAGGLNVGAQLHWMFAHDPDLHARTAQILTYPQYWAYRLT
GVPATERTSLGCHTDLWEPDADHVSDLAHKLDVADKLAPIYFATDVLGEVTPEVCRQTGLSPDTPVTCGIHDSNASLLPH
LMTRDAPFSVVSTGTWVIAMTIDGAPVALDPARDTLLNVNAYGAPVPSARFMGGREFEVIMGGSSVPPTSADAEAVLTQK
PLLLPSVAPTTGPFQGRIHGWTPSEPEVGTGLRSLVTSYYLALVTSECLTLTGHRGEIVVEGPFSENRAYLDMLAAATGC
PVLATGTATGTSQGAALLVTGPAVLAPLGDRVDPDELRPELAAYARHWRQALDPA

Specific function: L-lyxose utilization. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.53 [C]

Molecular weight: Translated: 48733; Mature: 48601

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHIAVIDIGKTNAKLALVDGETLAERAVVTRPNTVRPGPPWPHFDLEGHWRFLLDNLAA
CCEEEEEEECCCCCEEEEECCCHHHHCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FHKRYGVDAISITAHGASCVLLDKDGRLAAPMLDYEHTGPDDLASEYDQIRPDFAKTGSA
HHHHHCCCEEEEEECCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCHHHCCCC
RLAGGLNVGAQLHWMFAHDPDLHARTAQILTYPQYWAYRLTGVPATERTSLGCHTDLWEP
EEECCCCCCCEEEEEEECCCCCCCCHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC
DADHVSDLAHKLDVADKLAPIYFATDVLGEVTPEVCRQTGLSPDTPVTCGIHDSNASLLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCHHHH
HLMTRDAPFSVVSTGTWVIAMTIDGAPVALDPARDTLLNVNAYGAPVPSARFMGGREFEV
HHHCCCCCCEEEECCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCHHHCCCCEEEE
IMGGSSVPPTSADAEAVLTQKPLLLPSVAPTTGPFQGRIHGWTPSEPEVGTGLRSLVTSY
EECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH
YLALVTSECLTLTGHRGEIVVEGPFSENRAYLDMLAAATGCPVLATGTATGTSQGAALLV
HHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEE
TGPAVLAPLGDRVDPDELRPELAAYARHWRQALDPA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
THIAVIDIGKTNAKLALVDGETLAERAVVTRPNTVRPGPPWPHFDLEGHWRFLLDNLAA
CEEEEEEECCCCCEEEEECCCHHHHCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FHKRYGVDAISITAHGASCVLLDKDGRLAAPMLDYEHTGPDDLASEYDQIRPDFAKTGSA
HHHHHCCCEEEEEECCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCHHHCCCC
RLAGGLNVGAQLHWMFAHDPDLHARTAQILTYPQYWAYRLTGVPATERTSLGCHTDLWEP
EEECCCCCCCEEEEEEECCCCCCCCHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC
DADHVSDLAHKLDVADKLAPIYFATDVLGEVTPEVCRQTGLSPDTPVTCGIHDSNASLLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCHHHH
HLMTRDAPFSVVSTGTWVIAMTIDGAPVALDPARDTLLNVNAYGAPVPSARFMGGREFEV
HHHCCCCCCEEEECCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCHHHCCCCEEEE
IMGGSSVPPTSADAEAVLTQKPLLLPSVAPTTGPFQGRIHGWTPSEPEVGTGLRSLVTSY
EECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH
YLALVTSECLTLTGHRGEIVVEGPFSENRAYLDMLAAATGCPVLATGTATGTSQGAALLV
HHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEE
TGPAVLAPLGDRVDPDELRPELAAYARHWRQALDPA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-Xylulose [C]

Specific reaction: ATP + L-Xylulose = ADP + L-Xylulose 5-Phosphate. [C]

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA