| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is malE [H]
Identifier: 89055079
GI number: 89055079
Start: 2597511
End: 2598770
Strand: Reverse
Name: malE [H]
Synonym: Jann_2588
Alternate gene names: 89055079
Gene position: 2598770-2597511 (Counterclockwise)
Preceding gene: 89055082
Following gene: 89055078
Centisome position: 60.18
GC content: 61.27
Gene sequence:
>1260_bases ATGCTGCATAGAACCCGGAACACCCTTGCTGCCCTCGCCACCTCCGCCGCCGCATTAAGTGCCGCGGGTGCCGTAACGGC CCAAGAGGTCACGATTGAATATTGGCAGTATTTCTTTGAGGCCCGCGTGAATGCGATGGAGCAGCTGATCGAGAATTTTG AGGCCGCGAACCCGAACATCAACGTGGAAATGACCCACTTCCCCTATGCGGATTATCGCACGCGGACGGCCGTTGCCGTG CCGTCGGGCGAGGGTCCCGATATCGTGCAGCTCTTCTACGGTTGGTTGAACGATTACATCGACGAGGGCCTGATCCAGCC ACTTCCCGTAGATACCTTCTCGCCCGAGATGGTGGAGGCCGAGTTCTTCCCCATGGTCCAAGCCATGGAGCGTGATGGCC AATATTTCGCCCTGCCCACCGCCGTGCGGTCGCTGGCCTTGTTCTATAATGAGCGCATTCTGGATGCCGCCGGCGTCGAA GTCCCCACGACGCTGGACGAACTGGTCGCCGCCGCCGCCGCCACGACGGAGCGTGATGGCGCAGGCAACATCACGCAGGT GGGTTTCACCACCGGCATGACCGCTCAGGATCACCATTGGTTCCGCGAAGTGCTTGTCCGCCAGATGGGGGGTGAGCCCT ACACCGACGGCTATCAGACGGTGAATTACGACACCGACGCAGGCCGCGCGGCATTGGACTTCTATCTTGGCCTGGAAGAG CAGGGCGTGACGCAATCGGGCTTCATGGATGAACCCCAGGCGGCCTTCCGCGCGGGCCGCGCCGCGTTTCATATCGACGG ATCATTCCGCATCGGCGCGCTGAACGGAGAGCGGGGCCTGCAATGGGGCGTGACGGAGCTTCCGGCCAACAATGACGGGG TGCGATCAAACTATTCATCCTACTGGGTGAACGCGATCACGTCGTCTGCTGAAGGTCCCGAATACGACGCCTCCGTCCTG TTCATGGAGTATATCACCTCGGCTGAGGCGATGGAGATCTGGCTTGAAACCGTGGGCGAACTGCCCGCCCGCGCAGAGGT CGGCATGACGGAAGAAAACGCCAACGATCCGGTGTTTGGCCCGTTTATTCGCGGCCTTGAATACGCCAACACCACGATCT TCGCCGACGAGAGCGCGCAGCGCCAGGGCATGGTCGACATGGTGGAGCGGGTGCAGCTGCAAGATATGGATCCGGGCGAA AGCCTGACCATCGCGGCCGAGGCCGAGCAGACCCTGCTCAACGAATACTACAGCGACTGA
Upstream 100 bases:
>100_bases GCTCAACGCTGCTGCGTTAGCGTCATTCTAATGGCACCGGCCAAGAGAGTTCGGGCCCCCATAAAATAACGTCCAGACAT ATCATCTCAGGGAGAGACTC
Downstream 100 bases:
>100_bases GACCTCTCCAGTTGCACCTGGCCCCGGGCGATCCCTGCGTCCGGGGCCTCTTTCATCCTTTTGACCGAAGGCCCCGCCCA TGGCGAGCACCTCTGCCCCC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: MMBP; Maltodextrin-binding protein [H]
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLHRTRNTLAALATSAAALSAAGAVTAQEVTIEYWQYFFEARVNAMEQLIENFEAANPNINVEMTHFPYADYRTRTAVAV PSGEGPDIVQLFYGWLNDYIDEGLIQPLPVDTFSPEMVEAEFFPMVQAMERDGQYFALPTAVRSLALFYNERILDAAGVE VPTTLDELVAAAAATTERDGAGNITQVGFTTGMTAQDHHWFREVLVRQMGGEPYTDGYQTVNYDTDAGRAALDFYLGLEE QGVTQSGFMDEPQAAFRAGRAAFHIDGSFRIGALNGERGLQWGVTELPANNDGVRSNYSSYWVNAITSSAEGPEYDASVL FMEYITSAEAMEIWLETVGELPARAEVGMTEENANDPVFGPFIRGLEYANTTIFADESAQRQGMVDMVERVQLQDMDPGE SLTIAAEAEQTLLNEYYSD
Sequences:
>Translated_419_residues MLHRTRNTLAALATSAAALSAAGAVTAQEVTIEYWQYFFEARVNAMEQLIENFEAANPNINVEMTHFPYADYRTRTAVAV PSGEGPDIVQLFYGWLNDYIDEGLIQPLPVDTFSPEMVEAEFFPMVQAMERDGQYFALPTAVRSLALFYNERILDAAGVE VPTTLDELVAAAAATTERDGAGNITQVGFTTGMTAQDHHWFREVLVRQMGGEPYTDGYQTVNYDTDAGRAALDFYLGLEE QGVTQSGFMDEPQAAFRAGRAAFHIDGSFRIGALNGERGLQWGVTELPANNDGVRSNYSSYWVNAITSSAEGPEYDASVL FMEYITSAEAMEIWLETVGELPARAEVGMTEENANDPVFGPFIRGLEYANTTIFADESAQRQGMVDMVERVQLQDMDPGE SLTIAAEAEQTLLNEYYSD >Mature_419_residues MLHRTRNTLAALATSAAALSAAGAVTAQEVTIEYWQYFFEARVNAMEQLIENFEAANPNINVEMTHFPYADYRTRTAVAV PSGEGPDIVQLFYGWLNDYIDEGLIQPLPVDTFSPEMVEAEFFPMVQAMERDGQYFALPTAVRSLALFYNERILDAAGVE VPTTLDELVAAAAATTERDGAGNITQVGFTTGMTAQDHHWFREVLVRQMGGEPYTDGYQTVNYDTDAGRAALDFYLGLEE QGVTQSGFMDEPQAAFRAGRAAFHIDGSFRIGALNGERGLQWGVTELPANNDGVRSNYSSYWVNAITSSAEGPEYDASVL FMEYITSAEAMEIWLETVGELPARAEVGMTEENANDPVFGPFIRGLEYANTTIFADESAQRQGMVDMVERVQLQDMDPGE SLTIAAEAEQTLLNEYYSD
Specific function: Involved in an abc transport system for maltotriose [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46225; Mature: 46225
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHRTRNTLAALATSAAALSAAGAVTAQEVTIEYWQYFFEARVNAMEQLIENFEAANPNI CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NVEMTHFPYADYRTRTAVAVPSGEGPDIVQLFYGWLNDYIDEGLIQPLPVDTFSPEMVEA EEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH EFFPMVQAMERDGQYFALPTAVRSLALFYNERILDAAGVEVPTTLDELVAAAAATTERDG HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC AGNITQVGFTTGMTAQDHHWFREVLVRQMGGEPYTDGYQTVNYDTDAGRAALDFYLGLEE CCCEEEECEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCC QGVTQSGFMDEPQAAFRAGRAAFHIDGSFRIGALNGERGLQWGVTELPANNDGVRSNYSS CCCCCCCCCCCCHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH YWVNAITSSAEGPEYDASVLFMEYITSAEAMEIWLETVGELPARAEVGMTEENANDPVFG HHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH PFIRGLEYANTTIFADESAQRQGMVDMVERVQLQDMDPGESLTIAAEAEQTLLNEYYSD HHHHHHHHCCEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCC >Mature Secondary Structure MLHRTRNTLAALATSAAALSAAGAVTAQEVTIEYWQYFFEARVNAMEQLIENFEAANPNI CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NVEMTHFPYADYRTRTAVAVPSGEGPDIVQLFYGWLNDYIDEGLIQPLPVDTFSPEMVEA EEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH EFFPMVQAMERDGQYFALPTAVRSLALFYNERILDAAGVEVPTTLDELVAAAAATTERDG HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC AGNITQVGFTTGMTAQDHHWFREVLVRQMGGEPYTDGYQTVNYDTDAGRAALDFYLGLEE CCCEEEECEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCC QGVTQSGFMDEPQAAFRAGRAAFHIDGSFRIGALNGERGLQWGVTELPANNDGVRSNYSS CCCCCCCCCCCCHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH YWVNAITSSAEGPEYDASVLFMEYITSAEAMEIWLETVGELPARAEVGMTEENANDPVFG HHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH PFIRGLEYANTTIFADESAQRQGMVDMVERVQLQDMDPGESLTIAAEAEQTLLNEYYSD HHHHHHHHCCEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]