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The map label for this gene is rhaA [H]

Identifier: 89055082

GI number: 89055082

Start: 2602382

End: 2603617

Strand: Reverse

Name: rhaA [H]

Synonym: Jann_2591

Alternate gene names: 89055082

Gene position: 2603617-2602382 (Counterclockwise)

Preceding gene: 89055083

Following gene: 89055079

Centisome position: 60.3

GC content: 62.46

Gene sequence:

>1236_bases
ATGAGCGCCCTCTACGACACCGCCCGCCAGACCTTCGCTGATTGGGGCGTGGACACCGAGGCCGCGATGGCGCGTTTGGC
TGAGGTCTCGATCTCCATGCATTGCTGGCAGGGCGATGACGTTGTGGGATTTGAGGCCAAGACAGGCGCGTCGGGCGGCG
GGATTCAGGCCACCGGCAACCACCCGGGCCGGGCCCGCACACCAGCTGAGCTGCGCGCCGATCTGGAATTCGCCTACGCC
CAGATCCCCGGCAGCCATCGCCTCAACCTGCATGCGATGTACATGGACACCGACGCCACGCCCGACCGGGACGAGATTGA
GGTGGCGCATTTCGCACCCTGGATCGATTGGGCGACCGACCAGAACCTGGGCCTCGACTTCAACCCCACCTTCTTCGCCC
ATGCCAAGGCCGATGATAACCTGACGCTGTCGCATCCGGATCAAGGCATCCGTGACTTCTGGATCGAACATGGCAAACGC
TCGCGAGAGATCGCGTCGGCCATGGGCGCGGCTCAAGGCAATGCCTGTGTCAACAACATCTGGGTGCCGGACGGGTACAA
GGACATCCCCGTGGACCGCATGGCCGCACGGTCCCGGCTGGAAGCGTCCCTTGATGCGATGCTGGTGGACGCGCAGCCGC
ATATGCGCGATGCGGTGGAAAGCAAACTCTTTGGCATCGGGGTGGAGGCTTGCACCGTGGGAAGCCATGAATTTTATCTC
GGCTATGCGATCCGGAACAAAACCCTTCTGTGCCTGGACATGGGACATTTCCACCCGACGGAGAATGTGGCCGATAAGCT
GAGCGCAGTGGCCCTGTCACTGGATGAAATTCTGCTCCACGTCTCGCGCCCGATGCGGTGGGACAGTGACCATGTGATCC
TGCTTAACGATGATATTTTTGCGATGGCGCAGGAATTGGTCTTCGCAGATCTTCTGGACCGCACGCGCATCGGGCTCGAC
TTCTTCGACGCCACGATCAGTCGCACGGCGGCCTGGGTGATCGGCACGCGCAACATGCAAAAGGCGCTGCTGCGCGCGCT
GTTGATGCCGCGAGAGGAGCTGCAAACCGCTGAAGCCGCGCTGGATTACACCAAGCGCCTGATCCTGACCGAGGAGGTCA
AGGATCTGCCTGCGAGCGCTATCTGGCAGGAATTCTGCGACCGTCACTCCGTGCCCACCGGGCTGGCCCTGTCGTCGGCG
CTGGGGGATTACGACGCCTCCGTGTCGGGCCGTTAA

Upstream 100 bases:

>100_bases
ACATCGCTGAGGCCGCGTATTTCTTTGCCGCTGACCTGTCTGCCAAATCCACCGGCAACATCATCAACGTGGATGCGGGC
AACGCGCAGGCGTTCACAAG

Downstream 100 bases:

>100_bases
CCGCTGCCGCGCAGGGCCAGAAGGTTCGCCGTCAGCCGGTAGGCGCCCGGCACCAGATGCTCCAACTGGTGGTGCAGGTT
CAACGCGACATGGGCATGGC

Product: L-rhamnose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSALYDTARQTFADWGVDTEAAMARLAEVSISMHCWQGDDVVGFEAKTGASGGGIQATGNHPGRARTPAELRADLEFAYA
QIPGSHRLNLHAMYMDTDATPDRDEIEVAHFAPWIDWATDQNLGLDFNPTFFAHAKADDNLTLSHPDQGIRDFWIEHGKR
SREIASAMGAAQGNACVNNIWVPDGYKDIPVDRMAARSRLEASLDAMLVDAQPHMRDAVESKLFGIGVEACTVGSHEFYL
GYAIRNKTLLCLDMGHFHPTENVADKLSAVALSLDEILLHVSRPMRWDSDHVILLNDDIFAMAQELVFADLLDRTRIGLD
FFDATISRTAAWVIGTRNMQKALLRALLMPREELQTAEAALDYTKRLILTEEVKDLPASAIWQEFCDRHSVPTGLALSSA
LGDYDASVSGR

Sequences:

>Translated_411_residues
MSALYDTARQTFADWGVDTEAAMARLAEVSISMHCWQGDDVVGFEAKTGASGGGIQATGNHPGRARTPAELRADLEFAYA
QIPGSHRLNLHAMYMDTDATPDRDEIEVAHFAPWIDWATDQNLGLDFNPTFFAHAKADDNLTLSHPDQGIRDFWIEHGKR
SREIASAMGAAQGNACVNNIWVPDGYKDIPVDRMAARSRLEASLDAMLVDAQPHMRDAVESKLFGIGVEACTVGSHEFYL
GYAIRNKTLLCLDMGHFHPTENVADKLSAVALSLDEILLHVSRPMRWDSDHVILLNDDIFAMAQELVFADLLDRTRIGLD
FFDATISRTAAWVIGTRNMQKALLRALLMPREELQTAEAALDYTKRLILTEEVKDLPASAIWQEFCDRHSVPTGLALSSA
LGDYDASVSGR
>Mature_410_residues
SALYDTARQTFADWGVDTEAAMARLAEVSISMHCWQGDDVVGFEAKTGASGGGIQATGNHPGRARTPAELRADLEFAYAQ
IPGSHRLNLHAMYMDTDATPDRDEIEVAHFAPWIDWATDQNLGLDFNPTFFAHAKADDNLTLSHPDQGIRDFWIEHGKRS
REIASAMGAAQGNACVNNIWVPDGYKDIPVDRMAARSRLEASLDAMLVDAQPHMRDAVESKLFGIGVEACTVGSHEFYLG
YAIRNKTLLCLDMGHFHPTENVADKLSAVALSLDEILLHVSRPMRWDSDHVILLNDDIFAMAQELVFADLLDRTRIGLDF
FDATISRTAAWVIGTRNMQKALLRALLMPREELQTAEAALDYTKRLILTEEVKDLPASAIWQEFCDRHSVPTGLALSSAL
GDYDASVSGR

Specific function: Metabolism of L-rhamnose; first step. [C]

COG id: COG4806

COG function: function code G; L-rhamnose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI48994990, Length=409, Percent_Identity=55.5012224938875, Blast_Score=469, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009308
- InterPro:   IPR013022 [H]

Pfam domain/function: PF06134 RhaA [H]

EC number: =5.3.1.14 [H]

Molecular weight: Translated: 45404; Mature: 45272

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALYDTARQTFADWGVDTEAAMARLAEVSISMHCWQGDDVVGFEAKTGASGGGIQATGN
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCEEECCC
HPGRARTPAELRADLEFAYAQIPGSHRLNLHAMYMDTDATPDRDEIEVAHFAPWIDWATD
CCCCCCCHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCEEHHHHCCCCCCCCC
QNLGLDFNPTFFAHAKADDNLTLSHPDQGIRDFWIEHGKRSREIASAMGAAQGNACVNNI
CCCCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEE
WVPDGYKDIPVDRMAARSRLEASLDAMLVDAQPHMRDAVESKLFGIGVEACTVGSHEFYL
ECCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCHHEEECCCCEEEE
GYAIRNKTLLCLDMGHFHPTENVADKLSAVALSLDEILLHVSRPMRWDSDHVILLNDDIF
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHH
AMAQELVFADLLDRTRIGLDFFDATISRTAAWVIGTRNMQKALLRALLMPREELQTAEAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCHHHHHHHHHH
LDYTKRLILTEEVKDLPASAIWQEFCDRHSVPTGLALSSALGDYDASVSGR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SALYDTARQTFADWGVDTEAAMARLAEVSISMHCWQGDDVVGFEAKTGASGGGIQATGN
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCEEECCC
HPGRARTPAELRADLEFAYAQIPGSHRLNLHAMYMDTDATPDRDEIEVAHFAPWIDWATD
CCCCCCCHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCEEHHHHCCCCCCCCC
QNLGLDFNPTFFAHAKADDNLTLSHPDQGIRDFWIEHGKRSREIASAMGAAQGNACVNNI
CCCCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEE
WVPDGYKDIPVDRMAARSRLEASLDAMLVDAQPHMRDAVESKLFGIGVEACTVGSHEFYL
ECCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCHHEEECCCCEEEE
GYAIRNKTLLCLDMGHFHPTENVADKLSAVALSLDEILLHVSRPMRWDSDHVILLNDDIF
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHH
AMAQELVFADLLDRTRIGLDFFDATISRTAAWVIGTRNMQKALLRALLMPREELQTAEAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCHHHHHHHHHH
LDYTKRLILTEEVKDLPASAIWQEFCDRHSVPTGLALSSALGDYDASVSGR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]