| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055076
Identifier: 89055076
GI number: 89055076
Start: 2595162
End: 2595602
Strand: Reverse
Name: 89055076
Synonym: Jann_2585
Alternate gene names: NA
Gene position: 2595602-2595162 (Counterclockwise)
Preceding gene: 89055077
Following gene: 89055075
Centisome position: 60.11
GC content: 65.76
Gene sequence:
>441_bases ATGAGCGCCCTTGTCACCGGCGCACGGCTGGACCACGTGCACCTTTGTGTGGCCGACCGGGCGGCCTCCGTTCAATGGTA CGCCCGGGTGCTCGACCTCCATCCGCTCGGCCCGGGTGCTGAGGATCTGGCGGACGACCATCCGCTGTTTCTGGCCCCGG CCAGCGCGCCCGCCGATCACTGCCTGTCGCTGTTCACGGGCCCGTCGGCCCAGGGTGCTGACCGCAACGTGGCCTTCCGG GTCGATGCCTCGGCTTTGCTGGCGTTTCTCGACAGGCTTCCTGACCCCGAGGTAATGGCGCAGACAGGCGGCCTGCTGAG CCCAGACAACGTGAACGATTACGGTTTGGCGATGACGCTCGACTTCCTTGATCCCGATGGCAACGAGTTGGAACTTGTGT GCTATGATGCGGGCGCGGTTCGGGCAGGTCTGGGACGATGA
Upstream 100 bases:
>100_bases TCATGACCGGGGCGGCAATCTCGACCCTGCCGACGCTGATCTTTTTCCTGATCTTCCAGCGTTTCATCATCCGGGGCGTC GTGATGGCGGGCCTGAAGGG
Downstream 100 bases:
>100_bases CGGACACAAGCACCTTCCCCGATCCCACTTACCGCGACACCGTCCTTGCGCCGCTGTTTGAAGGCGTGAAGATCCATTTC GCGGACCACATGGACCGCAT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSALVTGARLDHVHLCVADRAASVQWYARVLDLHPLGPGAEDLADDHPLFLAPASAPADHCLSLFTGPSAQGADRNVAFR VDASALLAFLDRLPDPEVMAQTGGLLSPDNVNDYGLAMTLDFLDPDGNELELVCYDAGAVRAGLGR
Sequences:
>Translated_146_residues MSALVTGARLDHVHLCVADRAASVQWYARVLDLHPLGPGAEDLADDHPLFLAPASAPADHCLSLFTGPSAQGADRNVAFR VDASALLAFLDRLPDPEVMAQTGGLLSPDNVNDYGLAMTLDFLDPDGNELELVCYDAGAVRAGLGR >Mature_145_residues SALVTGARLDHVHLCVADRAASVQWYARVLDLHPLGPGAEDLADDHPLFLAPASAPADHCLSLFTGPSAQGADRNVAFRV DASALLAFLDRLPDPEVMAQTGGLLSPDNVNDYGLAMTLDFLDPDGNELELVCYDAGAVRAGLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15379; Mature: 15248
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVTGARLDHVHLCVADRAASVQWYARVLDLHPLGPGAEDLADDHPLFLAPASAPADH CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCHHH CLSLFTGPSAQGADRNVAFRVDASALLAFLDRLPDPEVMAQTGGLLSPDNVNDYGLAMTL HHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEE DFLDPDGNELELVCYDAGAVRAGLGR EEECCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure SALVTGARLDHVHLCVADRAASVQWYARVLDLHPLGPGAEDLADDHPLFLAPASAPADH CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCHHH CLSLFTGPSAQGADRNVAFRVDASALLAFLDRLPDPEVMAQTGGLLSPDNVNDYGLAMTL HHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEE DFLDPDGNELELVCYDAGAVRAGLGR EEECCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA