| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054905
Identifier: 89054905
GI number: 89054905
Start: 2413789
End: 2414094
Strand: Reverse
Name: 89054905
Synonym: Jann_2414
Alternate gene names: NA
Gene position: 2414094-2413789 (Counterclockwise)
Preceding gene: 89054906
Following gene: 89054901
Centisome position: 55.91
GC content: 62.75
Gene sequence:
>306_bases ATGTCCGAGGCTGACAGCAAGATCGAAATCGAAAGCATCACATCGCCGCATCGGACGGAACGGGTAGATCGCGTCAAATA CATGGCCATGCGGGAGGCATTGCTGCCGGTCTTGCCTGACACTGCGCCTGGGATCACGGTCGCCGAGGCGAAAGCCGAGC TGTTGAAACGCCTGTCGGACGAGGTGTTTCCGGGCGGCGCCAAGGCCGGCTGGTGGCTCAAGGCCGTGCAATTGGACCTG GAGGCCAAGGGTGTGATCGCAAGGGGGGCGACCAAGCCCGTCCGGCTCTATCGTCGCGATGGCTAG
Upstream 100 bases:
>100_bases AACCTGACGCAGCATTCGTGGTCGTTTTATGCGCGGCTCTTTGGGGCATGGGTCGGGATGGGTTTCCGCAATCCCAAGAT AATCGTGAACGGAGAGCTGA
Downstream 100 bases:
>100_bases AGATCGGCCGATAGCTTAGCCGAGGCTGTTGGCGTAGTCTTCAAGTTGGGTCGCGACCGTGCCCCATCCGTCAAGAAACC CCATATCTTCATGCGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSEADSKIEIESITSPHRTERVDRVKYMAMREALLPVLPDTAPGITVAEAKAELLKRLSDEVFPGGAKAGWWLKAVQLDL EAKGVIARGATKPVRLYRRDG
Sequences:
>Translated_101_residues MSEADSKIEIESITSPHRTERVDRVKYMAMREALLPVLPDTAPGITVAEAKAELLKRLSDEVFPGGAKAGWWLKAVQLDL EAKGVIARGATKPVRLYRRDG >Mature_100_residues SEADSKIEIESITSPHRTERVDRVKYMAMREALLPVLPDTAPGITVAEAKAELLKRLSDEVFPGGAKAGWWLKAVQLDLE AKGVIARGATKPVRLYRRDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11144; Mature: 11013
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEADSKIEIESITSPHRTERVDRVKYMAMREALLPVLPDTAPGITVAEAKAELLKRLSD CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH EVFPGGAKAGWWLKAVQLDLEAKGVIARGATKPVRLYRRDG HCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEECCC >Mature Secondary Structure SEADSKIEIESITSPHRTERVDRVKYMAMREALLPVLPDTAPGITVAEAKAELLKRLSD CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH EVFPGGAKAGWWLKAVQLDLEAKGVIARGATKPVRLYRRDG HCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA