Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054906

Identifier: 89054906

GI number: 89054906

Start: 2414081

End: 2414623

Strand: Reverse

Name: 89054906

Synonym: Jann_2415

Alternate gene names: NA

Gene position: 2414623-2414081 (Counterclockwise)

Preceding gene: 89054914

Following gene: 89054905

Centisome position: 55.92

GC content: 60.04

Gene sequence:

>543_bases
ATGACGATGTCCCAACGCGTGGGCTGTGCCTGCGGACAAGTGACAATGGACGTTGAGGGGCCGCATATTGCGACCGTTGA
ATGCCTTTGCGACAGTTGCCGGACGGCGGGCGAGGTTCTCATGACGCTGCCCGATGCACCGCGCGTCGTGGATGACAAGG
GGGCGACGCCCTTTGTCCTGCACCGCAAGGATCGCGTTCGGTTTCTGACCGGGGCGGATCAGCTGAAAGAATATCGCCTG
TCACCTGATGCAGGCACCCGGCGCGTGGTGGCGTCTTGCTGCAACATGCCGGTCTTCCTGGAGATGAAAGGCGGGCATTG
GCTGAGCCTTTATGGGCAATTATGGCCCGAGGGGACCTTGCCGATGTTGGACATGCGCACCATGACCGGTGATCTTGGAT
CCGCCGAAGACCTGCCCAACGATGTGCCGAACCTGACGCAGCATTCGTGGTCGTTTTATGCGCGGCTCTTTGGGGCATGG
GTCGGGATGGGTTTCCGCAATCCCAAGATAATCGTGAACGGAGAGCTGAATGTCCGAGGCTGA

Upstream 100 bases:

>100_bases
ATCTGGCCTCATCTCTGGTCCGGCTGGCAATGTAGCACGCATTCTTGACACATCAAACTGGACGGTCCAGTCTAATCAAT
AAGAAATCGAGGGTGATCTG

Downstream 100 bases:

>100_bases
CAGCAAGATCGAAATCGAAAGCATCACATCGCCGCATCGGACGGAACGGGTAGATCGCGTCAAATACATGGCCATGCGGG
AGGCATTGCTGCCGGTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTMSQRVGCACGQVTMDVEGPHIATVECLCDSCRTAGEVLMTLPDAPRVVDDKGATPFVLHRKDRVRFLTGADQLKEYRL
SPDAGTRRVVASCCNMPVFLEMKGGHWLSLYGQLWPEGTLPMLDMRTMTGDLGSAEDLPNDVPNLTQHSWSFYARLFGAW
VGMGFRNPKIIVNGELNVRG

Sequences:

>Translated_180_residues
MTMSQRVGCACGQVTMDVEGPHIATVECLCDSCRTAGEVLMTLPDAPRVVDDKGATPFVLHRKDRVRFLTGADQLKEYRL
SPDAGTRRVVASCCNMPVFLEMKGGHWLSLYGQLWPEGTLPMLDMRTMTGDLGSAEDLPNDVPNLTQHSWSFYARLFGAW
VGMGFRNPKIIVNGELNVRG
>Mature_179_residues
TMSQRVGCACGQVTMDVEGPHIATVECLCDSCRTAGEVLMTLPDAPRVVDDKGATPFVLHRKDRVRFLTGADQLKEYRLS
PDAGTRRVVASCCNMPVFLEMKGGHWLSLYGQLWPEGTLPMLDMRTMTGDLGSAEDLPNDVPNLTQHSWSFYARLFGAWV
GMGFRNPKIIVNGELNVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19878; Mature: 19747

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSQRVGCACGQVTMDVEGPHIATVECLCDSCRTAGEVLMTLPDAPRVVDDKGATPFVL
CCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCEEE
HRKDRVRFLTGADQLKEYRLSPDAGTRRVVASCCNMPVFLEMKGGHWLSLYGQLWPEGTL
ECCCCEEEEECHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCC
PMLDMRTMTGDLGSAEDLPNDVPNLTQHSWSFYARLFGAWVGMGFRNPKIIVNGELNVRG
CEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECC
>Mature Secondary Structure 
TMSQRVGCACGQVTMDVEGPHIATVECLCDSCRTAGEVLMTLPDAPRVVDDKGATPFVL
CCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCEEE
HRKDRVRFLTGADQLKEYRLSPDAGTRRVVASCCNMPVFLEMKGGHWLSLYGQLWPEGTL
ECCCCEEEEECHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCC
PMLDMRTMTGDLGSAEDLPNDVPNLTQHSWSFYARLFGAWVGMGFRNPKIIVNGELNVRG
CEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA