Click here to switch to the map view.

The map label for this gene is 89054901

Identifier: 89054901

GI number: 89054901

Start: 2411237

End: 2412109

Strand: Reverse

Name: 89054901

Synonym: Jann_2410

Alternate gene names: NA

Gene position: 2412109-2411237 (Counterclockwise)

Preceding gene: 89054905

Following gene: 89054899

Centisome position: 55.86

GC content: 58.76

Gene sequence:

>873_bases
ATGCAGTCTTCACCCAGACAAACGGCCATAGCACTGATGTGCGCAAGCGCCTGCGTTATTCCCGTGGTCGATACGATCGC
CAAGTCGCTCACCGACGTGGTCTCTCCGTTCTTTCTTGTCGCGGCCCGCTATGGGATTGGTGCAGCTCTGGCAGCCATGC
TGTTCAAGTCCCCCAAACGGGCCTATCTTTCCTTCAGCAAAGCGCCTGGATTGCATGTCCTGAGATCGGCCATGCTTGTC
GCTGCAATGGTTTGTTTCTATTGGGCCCTAACCGATCTGCCTGTTGCAACGGCGCTTGGGGGGTACTTTACCGGTCCCAT
CATCGCCACACTTGTGTCTATCGCGCTCCTTGGGGAAAAAGCGCGGCTGGCCACGCTGGCCGCCGTGACGCTCGGCTTTG
CGGGTGCCCTGCTTATCCTGCGCCCCGAAGGCGGAGCCACTTCGGGATCGGTTCTTGCGATGACGAGTGGTCTGCTGTCC
GGCTTTTATCTCGTATTGACGCGAACCGCGTCGCTGGCAGTTCGGGCCGAAGATAATGTATTGATCCAGAGCGTTATCGG
CGTGCTTCTGGTCGCTCCGATTGCCGTGCTCAACCTCCCATCCCCCGACCTGTCCATGATTGGCTGGATCGTTCTGATGG
GTTGCTTGTCCTTCGTGGCGCATGGCCTGTTCCTGGCGGCGTTTCGAACGTTGGATGTCGGGACGCTGGCGCCACTGGCT
TATCTTGAAATTGCAGTGGCGGCGCTTCTTGGCTGGACATTGTTTGGCGATGTTCCGTCCGGCCTCGCCTGGTGCGGGAT
CCTGTGCGTTGTCACGGCAGGGGTCATCATATCCACGGCCGGTGGCCCGTCAAAATCTGACCTTCAGAATTGA

Upstream 100 bases:

>100_bases
AATCCGGTTCTTTCATAACTGTCTAAATTCATTTGACGGGTTACTCAAAATGCAAGATAACCTATGAAAGCACTTTTGCG
CGTTATTCGAAAGACATCAA

Downstream 100 bases:

>100_bases
GGCCAACGGTGCCGACTGTCATGACCTTTGAGAGCCTTGTCGCACCGCCAACGACACATCCCTGTGCGGACGCCATCGAC
CAGTGCCGCGCAGTAACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Permease; Transmembrane Protein; DMT Family Permease; Transporter Permease Protein; Permease DMT Superfamily; Transporter RarD Family DMT Superfamily; Transporter Dme Family; Integral Membrane ; Transporter Protein; Permeases Of Drug/Metabolite Transporter Superfamily; DMT Superfamily Permease; Dme Family Transporter; Multidrug ABC Transporter; Permease Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter Superfamily Permease; Transporter DME Family; S-Adenosylmethionine Uptake Transporter; Permease Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQSSPRQTAIALMCASACVIPVVDTIAKSLTDVVSPFFLVAARYGIGAALAAMLFKSPKRAYLSFSKAPGLHVLRSAMLV
AAMVCFYWALTDLPVATALGGYFTGPIIATLVSIALLGEKARLATLAAVTLGFAGALLILRPEGGATSGSVLAMTSGLLS
GFYLVLTRTASLAVRAEDNVLIQSVIGVLLVAPIAVLNLPSPDLSMIGWIVLMGCLSFVAHGLFLAAFRTLDVGTLAPLA
YLEIAVAALLGWTLFGDVPSGLAWCGILCVVTAGVIISTAGGPSKSDLQN

Sequences:

>Translated_290_residues
MQSSPRQTAIALMCASACVIPVVDTIAKSLTDVVSPFFLVAARYGIGAALAAMLFKSPKRAYLSFSKAPGLHVLRSAMLV
AAMVCFYWALTDLPVATALGGYFTGPIIATLVSIALLGEKARLATLAAVTLGFAGALLILRPEGGATSGSVLAMTSGLLS
GFYLVLTRTASLAVRAEDNVLIQSVIGVLLVAPIAVLNLPSPDLSMIGWIVLMGCLSFVAHGLFLAAFRTLDVGTLAPLA
YLEIAVAALLGWTLFGDVPSGLAWCGILCVVTAGVIISTAGGPSKSDLQN
>Mature_290_residues
MQSSPRQTAIALMCASACVIPVVDTIAKSLTDVVSPFFLVAARYGIGAALAAMLFKSPKRAYLSFSKAPGLHVLRSAMLV
AAMVCFYWALTDLPVATALGGYFTGPIIATLVSIALLGEKARLATLAAVTLGFAGALLILRPEGGATSGSVLAMTSGLLS
GFYLVLTRTASLAVRAEDNVLIQSVIGVLLVAPIAVLNLPSPDLSMIGWIVLMGCLSFVAHGLFLAAFRTLDVGTLAPLA
YLEIAVAALLGWTLFGDVPSGLAWCGILCVVTAGVIISTAGGPSKSDLQN

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29800; Mature: 29800

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSPRQTAIALMCASACVIPVVDTIAKSLTDVVSPFFLVAARYGIGAALAAMLFKSPKR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AYLSFSKAPGLHVLRSAMLVAAMVCFYWALTDLPVATALGGYFTGPIIATLVSIALLGEK
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCH
ARLATLAAVTLGFAGALLILRPEGGATSGSVLAMTSGLLSGFYLVLTRTASLAVRAEDNV
HHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH
LIQSVIGVLLVAPIAVLNLPSPDLSMIGWIVLMGCLSFVAHGLFLAAFRTLDVGTLAPLA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YLEIAVAALLGWTLFGDVPSGLAWCGILCVVTAGVIISTAGGPSKSDLQN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MQSSPRQTAIALMCASACVIPVVDTIAKSLTDVVSPFFLVAARYGIGAALAAMLFKSPKR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AYLSFSKAPGLHVLRSAMLVAAMVCFYWALTDLPVATALGGYFTGPIIATLVSIALLGEK
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCH
ARLATLAAVTLGFAGALLILRPEGGATSGSVLAMTSGLLSGFYLVLTRTASLAVRAEDNV
HHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH
LIQSVIGVLLVAPIAVLNLPSPDLSMIGWIVLMGCLSFVAHGLFLAAFRTLDVGTLAPLA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YLEIAVAALLGWTLFGDVPSGLAWCGILCVVTAGVIISTAGGPSKSDLQN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA