| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054808
Identifier: 89054808
GI number: 89054808
Start: 2321316
End: 2321792
Strand: Direct
Name: 89054808
Synonym: Jann_2317
Alternate gene names: NA
Gene position: 2321316-2321792 (Clockwise)
Preceding gene: 89054807
Following gene: 89054809
Centisome position: 53.76
GC content: 64.78
Gene sequence:
>477_bases GTGATCACCGCTCACCTCCCGTCCGGCTACGTGCTGGGGGCCTCCCTCGGCCTGACCGGCACCGCATTTGCCGCCGCCCT GATTGGCGCGGTGTTCCCGGACCTGGACCTGCTGATGTTCTACGTCATCGACGACCGGGCCATTCATCACCACCGCTATT GGGTCCACGCGCCAGCCTTTGCGGCCTGTGTCGGCGGCGCGCTGATCGTGTGCGCGAGCCTCTGGGCGCCCGTATGGAGA TGGCCCGCCATCGCCTTCACCGCCGCTTGGTTGCTGCACATCGTCCTCGACAGCATTGGCGGTGGGATCATGTGGCTCTG GCCGTATTCCGACACGTTGGCCTCAGTCATCATCGTGCCGGGGCGCGAGGGCGTGCCCTGGGTTCTGGCATTTCTGACCC ATTGGTCGATCGTCTTTGAGTTGATGATCTGGGCCGTCGCGGCGGCCTTCTGGATAAGGCGACGTCAGCATGACTGA
Upstream 100 bases:
>100_bases ACGCCGTGCCGGGCGCGCAACCGCCTGAGCAATGGATGGCCATCATCGACGACCTGACGACACAGCTGGAAAAGCTGCAA CAGGACGAAGAGGCGCAGGG
Downstream 100 bases:
>100_bases CACCACACCCGCTGCCCGCACGCGCCTGTCGACCGGCGAATTCATTGCCCTGATCGGCATGATGTTCGGCACGATTGCAT TCTCCATTGATGCGATGTTG
Product: membrane-bound metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MITAHLPSGYVLGASLGLTGTAFAAALIGAVFPDLDLLMFYVIDDRAIHHHRYWVHAPAFAACVGGALIVCASLWAPVWR WPAIAFTAAWLLHIVLDSIGGGIMWLWPYSDTLASVIIVPGREGVPWVLAFLTHWSIVFELMIWAVAAAFWIRRRQHD
Sequences:
>Translated_158_residues MITAHLPSGYVLGASLGLTGTAFAAALIGAVFPDLDLLMFYVIDDRAIHHHRYWVHAPAFAACVGGALIVCASLWAPVWR WPAIAFTAAWLLHIVLDSIGGGIMWLWPYSDTLASVIIVPGREGVPWVLAFLTHWSIVFELMIWAVAAAFWIRRRQHD >Mature_158_residues MITAHLPSGYVLGASLGLTGTAFAAALIGAVFPDLDLLMFYVIDDRAIHHHRYWVHAPAFAACVGGALIVCASLWAPVWR WPAIAFTAAWLLHIVLDSIGGGIMWLWPYSDTLASVIIVPGREGVPWVLAFLTHWSIVFELMIWAVAAAFWIRRRQHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17474; Mature: 17474
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITAHLPSGYVLGASLGLTGTAFAAALIGAVFPDLDLLMFYVIDDRAIHHHRYWVHAPAF CEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCEEEEECHHH AACVGGALIVCASLWAPVWRWPAIAFTAAWLLHIVLDSIGGGIMWLWPYSDTLASVIIVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHEEEEEC GREGVPWVLAFLTHWSIVFELMIWAVAAAFWIRRRQHD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITAHLPSGYVLGASLGLTGTAFAAALIGAVFPDLDLLMFYVIDDRAIHHHRYWVHAPAF CEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCEEEEECHHH AACVGGALIVCASLWAPVWRWPAIAFTAAWLLHIVLDSIGGGIMWLWPYSDTLASVIIVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHEEEEEC GREGVPWVLAFLTHWSIVFELMIWAVAAAFWIRRRQHD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA