Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is ywbO [H]

Identifier: 89054807

GI number: 89054807

Start: 2320654

End: 2321319

Strand: Direct

Name: ywbO [H]

Synonym: Jann_2316

Alternate gene names: 89054807

Gene position: 2320654-2321319 (Clockwise)

Preceding gene: 89054806

Following gene: 89054808

Centisome position: 53.74

GC content: 65.02

Gene sequence:

>666_bases
ATGATCAAACTCGACATCCTCTCGGACCCTATTTGCCCCTGGTGCTATATCGGCTGGTCGAATCTGGCCCGTGCGATGGA
GGCGAGGCCGAACCACCCCTTCACCATCGAATGGCATCCCTTCCAGCTGAACCCCGACATGCCCGAGGATGGCATGGATC
GCCGCGCGTATCTGGAGGGCAAATTCGGCGGCAAGGACGCGGCCGTGCGCGCCTATGCGCCCGTGGCCGAAAAGGCCGCA
GAGGCGGGGCTGACGCTGAACCTTGAGGGCATCAAACGCACGCCCAACACCCGCGATGCCCATCGTCTGATCCACTGGGC
GGGGATCGAGGGACGGCAGACGCCGCTGGTGCTGGCGCTGTTCCGGGCCTATTTCGTCGAGGGGCGCGATATCGGCGACC
GCGACACGCTTCTGGAGATCGCCGAAAGCGTCGGACTGGACCGCGCCATGATCGCCAAGCTCTACGACAGCGGCGCCGAT
GCCGAGGATATCAAAGCCCGCGACGCCCATGCCCGCGAACGCGGTGTGCAGGCCGTGCCCACGTTCATCGTGGCCAACCA
GCACGCCGTGCCGGGCGCGCAACCGCCTGAGCAATGGATGGCCATCATCGACGACCTGACGACACAGCTGGAAAAGCTGC
AACAGGACGAAGAGGCGCAGGGGTGA

Upstream 100 bases:

>100_bases
AACATCCCCGCGCCTATCTGCATCTGCCAGATGGCCTGCCCCGGGGCGCGAATGGAAAATTGAACCGCCGCGCGCTGGCG
CAGGCGGTGAAGGACATGAC

Downstream 100 bases:

>100_bases
TCACCGCTCACCTCCCGTCCGGCTACGTGCTGGGGGCCTCCCTCGGCCTGACCGGCACCGCATTTGCCGCCGCCCTGATT
GGCGCGGTGTTCCCGGACCT

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEGKFGGKDAAVRAYAPVAEKAA
EAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLALFRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGAD
AEDIKARDAHARERGVQAVPTFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG

Sequences:

>Translated_221_residues
MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEGKFGGKDAAVRAYAPVAEKAA
EAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLALFRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGAD
AEDIKARDAHARERGVQAVPTFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG
>Mature_221_residues
MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEGKFGGKDAAVRAYAPVAEKAA
EAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLALFRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGAD
AEDIKARDAHARERGVQAVPTFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 24624; Mature: 24624

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEG
CEEECCCCCCCCCCEECCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECC
KFGGKDAAVRAYAPVAEKAAEAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLAL
CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHEECCCCCCCHHHHHH
FRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGADAEDIKARDAHARERGVQAVP
HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCC
TFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKLDILSDPICPWCYIGWSNLARAMEARPNHPFTIEWHPFQLNPDMPEDGMDRRAYLEG
CEEECCCCCCCCCCEECCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECC
KFGGKDAAVRAYAPVAEKAAEAGLTLNLEGIKRTPNTRDAHRLIHWAGIEGRQTPLVLAL
CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHEECCCCCCCHHHHHH
FRAYFVEGRDIGDRDTLLEIAESVGLDRAMIAKLYDSGADAEDIKARDAHARERGVQAVP
HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCC
TFIVANQHAVPGAQPPEQWMAIIDDLTTQLEKLQQDEEAQG
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]