| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054800
Identifier: 89054800
GI number: 89054800
Start: 2312920
End: 2313642
Strand: Direct
Name: 89054800
Synonym: Jann_2309
Alternate gene names: NA
Gene position: 2312920-2313642 (Clockwise)
Preceding gene: 89054799
Following gene: 89054802
Centisome position: 53.56
GC content: 60.44
Gene sequence:
>723_bases ATGCAATTGCCCCCTGCCCCTCCTCCTCCCCGCCGCGGGATCCTGTCGACCCTTCGGTCCAACTTTCTGACGGGGTTGAT CGTTATCGCGCCGATCGGCATTACGATCTGGCTGATCTGGACGCTGACGGGCTGGATCGACAGCTGGGTGCTGCCATTTA TTCCCGACGCCTATAACCCCTCGCTCCTGATCAATGACTGGACGGGCATCCAGATCAATATCCGGGGCATTGGCGTGGTG ACCTTCCTGATTTTCACGATGTTTGTGGGGTGGGTGGCCAAGGGCCTGATCGGCCGGTCGATGATCCGGTGGGCGGAAAG TCTTGTGCTGTCGATCCCGCTGATCCGCACGCTTTATTCCGGCCTCAAGCAAATCGCCGAAACGATCCTGCAACAGGGGC AGCAGAACTTCGACAAGGCTTGCCTGGTGGAGTATCCGCGCAAGGGGATCTGGGCGATTGCGTTCATTTCCACGACGGCT AAGGGGGAGATCGCCAAGCGTGCCCCCGAGGATATGGTGTCAGTTTTCCTGCCCACCACGCCGAACCCGACATCGGGCTT CCTGCTGTTTGTGCCGGTGAAGGACGCGATTGTGCTGGATATGTCGGTGGAGGATGCGGCGAAGCTGATTATCTCGGCCG GGCTCGTCTATCCCAACGGGCAAGACCCGACCCAACCCCCGACCCAAGGCCGGGCACCGGCGCCGGATATCTCGACCGTC TAA
Upstream 100 bases:
>100_bases TAAGCACACCAAATGCGGGCCTCACGGTGCCCGCGCTTGTGCGCAGCCTCTCTGCCGCCTAAATACCCCAAGACCCCTCC GCCTGAGAGCCGCCGCCAAG
Downstream 100 bases:
>100_bases GCGTCCCCTGCATAGGACAAGGCGCGGACCGGTCTGGCCCACGCCTCCCTTTTCACCTGGGCCTTACAACTCCGGGGGGA GCGGCTTTTCCTTTGGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNPSLLINDWTGIQINIRGIGVV TFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYSGLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTA KGEIAKRAPEDMVSVFLPTTPNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV
Sequences:
>Translated_240_residues MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNPSLLINDWTGIQINIRGIGVV TFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYSGLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTA KGEIAKRAPEDMVSVFLPTTPNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV >Mature_240_residues MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNPSLLINDWTGIQINIRGIGVV TFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYSGLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTA KGEIAKRAPEDMVSVFLPTTPNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26260; Mature: 26260
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC SLLINDWTGIQINIRGIGVVTFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYS CEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTAKGEIAKRAPEDMVSVFLPTT HHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHCHHHHHEEECCCC PNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV CCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQLPPAPPPPRRGILSTLRSNFLTGLIVIAPIGITIWLIWTLTGWIDSWVLPFIPDAYNP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC SLLINDWTGIQINIRGIGVVTFLIFTMFVGWVAKGLIGRSMIRWAESLVLSIPLIRTLYS CEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLKQIAETILQQGQQNFDKACLVEYPRKGIWAIAFISTTAKGEIAKRAPEDMVSVFLPTT HHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHCHHHHHEEECCCC PNPTSGFLLFVPVKDAIVLDMSVEDAAKLIISAGLVYPNGQDPTQPPTQGRAPAPDISTV CCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA