| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is psuG
Identifier: 89054799
GI number: 89054799
Start: 2311914
End: 2312822
Strand: Direct
Name: psuG
Synonym: Jann_2308
Alternate gene names: 89054799
Gene position: 2311914-2312822 (Clockwise)
Preceding gene: 89054798
Following gene: 89054800
Centisome position: 53.54
GC content: 67.33
Gene sequence:
>909_bases ATGACCCTGCCGCTGACCTTTTCGCCCGAGGTGGCGGAGGCCCGCGCGGCCGGCGCGCCTCTTGTCGCGCTGGAATCGAC GATCATCACCCATGGCATGCCCTACCCCCAAAACCTCGATACGGCCCGCGCGGTGGAGGCGGAGGTGCGCGCGGCAGGCG CAGTCCCCGCGACCATCGCGATCATGGATGGACGGATGCACATTGGCCTGACCGGGACAGAATTGGAGGTCCTGGCACAG GCCGACGGCGTGGCGAAACTGAGCCGCGCTGATCTGGCGGCGTGCCTCGCGCGCGGCGGGGTTGGGGCGACGACTGTGGC GGCCACGATGATCTGTGCCGCGCTGGCAGGCATCCACGTGTTTGCCACCGGTGGCATCGGGGGCGTTCACAAGGGCGCGG AGGACACGTTTGATATCTCCGCTGATCTGCGGGAACTGGCCCATACGCCCGTGACCGTGATTGCAGCGGGCGCCAAGGCC ATCCTTGATCTGCCGAAGACGCTGGAGGTGCTGGAAACCCTCGGTGTGCCGGTCATCGCCCATGGCCAGGACGCCTTTCC CGCCTTCTGGAGTCGGGACAGCGGGCTGCCCGCGCCTCTGCGGGCCGACAGCGCCACAGAGATCGCCCGGGCCCATCTGA TGCGTTCCAAACTTGGGCTGCCCGGCGGGCAATTGGTCGCCAACCCGATCCCTGAAGACGCTGAGATCCCGGCCAGCACA CTCGCACCGCTCATCGTCCAGGCGCAATCTGAGGCGGACGCGAAAGGGGTCGCGCGCAAGGCCGTCACGCCGTTCCTTCT CAACCGGTTGTTTGAGCTGACGGACGGGGCGACGCTGGCATCCAATATCGCGCTGGTCCTGAACAATGCGCGCCTGGGCG CGGCTGTGGCACGCGCACTCACAACGTAA
Upstream 100 bases:
>100_bases TGGCCGCTCATATCGCCGCTGAAGTTGGAGGGTCCAGCCGGGACGCGGCCCTGAGGACGGCTGTCGACGCCGCCGCCACT TACGTTTCGGGAGACACGCC
Downstream 100 bases:
>100_bases GCACACCAAATGCGGGCCTCACGGTGCCCGCGCTTGTGCGCAGCCTCTCTGCCGCCTAAATACCCCAAGACCCCTCCGCC TGAGAGCCGCCGCCAAGATG
Product: indigoidine synthase A like protein
Products: NA
Alternate protein names: PsiMP glycosidase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTLPLTFSPEVAEARAAGAPLVALESTIITHGMPYPQNLDTARAVEAEVRAAGAVPATIAIMDGRMHIGLTGTELEVLAQ ADGVAKLSRADLAACLARGGVGATTVAATMICAALAGIHVFATGGIGGVHKGAEDTFDISADLRELAHTPVTVIAAGAKA ILDLPKTLEVLETLGVPVIAHGQDAFPAFWSRDSGLPAPLRADSATEIARAHLMRSKLGLPGGQLVANPIPEDAEIPAST LAPLIVQAQSEADAKGVARKAVTPFLLNRLFELTDGATLASNIALVLNNARLGAAVARALTT
Sequences:
>Translated_302_residues MTLPLTFSPEVAEARAAGAPLVALESTIITHGMPYPQNLDTARAVEAEVRAAGAVPATIAIMDGRMHIGLTGTELEVLAQ ADGVAKLSRADLAACLARGGVGATTVAATMICAALAGIHVFATGGIGGVHKGAEDTFDISADLRELAHTPVTVIAAGAKA ILDLPKTLEVLETLGVPVIAHGQDAFPAFWSRDSGLPAPLRADSATEIARAHLMRSKLGLPGGQLVANPIPEDAEIPAST LAPLIVQAQSEADAKGVARKAVTPFLLNRLFELTDGATLASNIALVLNNARLGAAVARALTT >Mature_301_residues TLPLTFSPEVAEARAAGAPLVALESTIITHGMPYPQNLDTARAVEAEVRAAGAVPATIAIMDGRMHIGLTGTELEVLAQA DGVAKLSRADLAACLARGGVGATTVAATMICAALAGIHVFATGGIGGVHKGAEDTFDISADLRELAHTPVTVIAAGAKAI LDLPKTLEVLETLGVPVIAHGQDAFPAFWSRDSGLPAPLRADSATEIARAHLMRSKLGLPGGQLVANPIPEDAEIPASTL APLIVQAQSEADAKGVARKAVTPFLLNRLFELTDGATLASNIALVLNNARLGAAVARALTT
Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil
COG id: COG2313
COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family
Homologues:
Organism=Escherichia coli, GI1788490, Length=295, Percent_Identity=57.6271186440678, Blast_Score=311, Evalue=4e-86, Organism=Caenorhabditis elegans, GI25147470, Length=299, Percent_Identity=50.1672240802676, Blast_Score=289, Evalue=1e-78, Organism=Drosophila melanogaster, GI24580669, Length=302, Percent_Identity=49.0066225165563, Blast_Score=265, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSUG_JANSC (Q28PY7)
Other databases:
- EMBL: CP000264 - RefSeq: YP_510250.1 - ProteinModelPortal: Q28PY7 - SMR: Q28PY7 - STRING: Q28PY7 - GeneID: 3934764 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_2308 - eggNOG: COG2313 - HOGENOM: HBG308892 - OMA: PATIAVM - PhylomeDB: Q28PY7 - ProtClustDB: CLSK862888 - BioCyc: JSP290400:JANN_2308-MONOMER - HAMAP: MF_01876 - InterPro: IPR022830 - InterPro: IPR007342 - PANTHER: PTHR10584:SF1
Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA
EC number: NA
Molecular weight: Translated: 30781; Mature: 30650
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLTFSPEVAEARAAGAPLVALESTIITHGMPYPQNLDTARAVEAEVRAAGAVPATIA CCCCCCCCCHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE IMDGRMHIGLTGTELEVLAQADGVAKLSRADLAACLARGGVGATTVAATMICAALAGIHV EECCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEE FATGGIGGVHKGAEDTFDISADLRELAHTPVTVIAAGAKAILDLPKTLEVLETLGVPVIA EEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHCCCEEE HGQDAFPAFWSRDSGLPAPLRADSATEIARAHLMRSKLGLPGGQLVANPIPEDAEIPAST CCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHH LAPLIVQAQSEADAKGVARKAVTPFLLNRLFELTDGATLASNIALVLNNARLGAAVARAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCHHHHHHHHHH TT CC >Mature Secondary Structure TLPLTFSPEVAEARAAGAPLVALESTIITHGMPYPQNLDTARAVEAEVRAAGAVPATIA CCCCCCCCHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE IMDGRMHIGLTGTELEVLAQADGVAKLSRADLAACLARGGVGATTVAATMICAALAGIHV EECCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEE FATGGIGGVHKGAEDTFDISADLRELAHTPVTVIAAGAKAILDLPKTLEVLETLGVPVIA EEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHCCCEEE HGQDAFPAFWSRDSGLPAPLRADSATEIARAHLMRSKLGLPGGQLVANPIPEDAEIPAST CCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHH LAPLIVQAQSEADAKGVARKAVTPFLLNRLFELTDGATLASNIALVLNNARLGAAVARAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCHHHHHHHHHH TT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA