| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054234
Identifier: 89054234
GI number: 89054234
Start: 1736020
End: 1736580
Strand: Direct
Name: 89054234
Synonym: Jann_1743
Alternate gene names: NA
Gene position: 1736020-1736580 (Clockwise)
Preceding gene: 89054225
Following gene: 89054235
Centisome position: 40.2
GC content: 66.31
Gene sequence:
>561_bases ATGATGCTCTATGAATGGCGCGTGTCGCTGCTGGATGGCGGGCAATCCGTGCGCCTGTCGGGCCAGGGCATCTGGATCGG TGACGATGTCTTTCCATGGTCGAGGCTGACCGATGTGAGTTTCGTGCGCTATCAGACACGCGGCGGATTAAGTGAGGATT TGTCACTGTCGTTCGGGCCTGACGTGAAACGAAAGTTGCGCTGGACCGGCCCTGGACGCAAACGCGGGCCGTGGCGGGCC ATGTTGATGGCCTTTGCCGATCAGGCGGCCCGCGCGCGCCCTGATCTGAGGCTGCGCGACGGCCCCGATGCGCAGGAGCA ACGCACGGCTCGGTGGATCGGGCTGGGTGTCGCGGGCGTGGCGGTGGGCATCATGGGGGTGGTGTTCGCCTCGGGCCCGT CAATCTGGGGCGCGCTGGCGGGCGGGTGGATTGGCCTGACTGGTGGCTCCATCGGGGCGATCACGTACATGCATTACGCG CGGGTGGAGGAACCGCCCCGCCTCGACTGGATCAGCTTCGCCGCGCGGGAGGGTCAGCCGGGCGAACTGCCTGCGAATTA G
Upstream 100 bases:
>100_bases TGCCTGCATTCGCGCGGTCCTGACCGGCGGATTGTCTTACTTGTCGCGATGATGCCCGCGCGCCACGTTCCTTACGCAGG CGAGGACGAGGAGACGGCCC
Downstream 100 bases:
>100_bases GCAAACGGCGTTTTGCGGGGCATCGGAGGGCGGACGAGCCTTGCCTGCCTCAATCCCCCGCGCCTAGGCTTGGGTCAATG TTAGACGCGGCCACTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MMLYEWRVSLLDGGQSVRLSGQGIWIGDDVFPWSRLTDVSFVRYQTRGGLSEDLSLSFGPDVKRKLRWTGPGRKRGPWRA MLMAFADQAARARPDLRLRDGPDAQEQRTARWIGLGVAGVAVGIMGVVFASGPSIWGALAGGWIGLTGGSIGAITYMHYA RVEEPPRLDWISFAAREGQPGELPAN
Sequences:
>Translated_186_residues MMLYEWRVSLLDGGQSVRLSGQGIWIGDDVFPWSRLTDVSFVRYQTRGGLSEDLSLSFGPDVKRKLRWTGPGRKRGPWRA MLMAFADQAARARPDLRLRDGPDAQEQRTARWIGLGVAGVAVGIMGVVFASGPSIWGALAGGWIGLTGGSIGAITYMHYA RVEEPPRLDWISFAAREGQPGELPAN >Mature_186_residues MMLYEWRVSLLDGGQSVRLSGQGIWIGDDVFPWSRLTDVSFVRYQTRGGLSEDLSLSFGPDVKRKLRWTGPGRKRGPWRA MLMAFADQAARARPDLRLRDGPDAQEQRTARWIGLGVAGVAVGIMGVVFASGPSIWGALAGGWIGLTGGSIGAITYMHYA RVEEPPRLDWISFAAREGQPGELPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20359; Mature: 20359
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLYEWRVSLLDGGQSVRLSGQGIWIGDDVFPWSRLTDVSFVRYQTRGGLSEDLSLSFGP CEEEEEEEEEECCCCEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCC DVKRKLRWTGPGRKRGPWRAMLMAFADQAARARPDLRLRDGPDAQEQRTARWIGLGVAGV CCHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCHHHH AVGIMGVVFASGPSIWGALAGGWIGLTGGSIGAITYMHYARVEEPPRLDWISFAAREGQP HHHHHHHHHHCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC GELPAN CCCCCC >Mature Secondary Structure MMLYEWRVSLLDGGQSVRLSGQGIWIGDDVFPWSRLTDVSFVRYQTRGGLSEDLSLSFGP CEEEEEEEEEECCCCEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCC DVKRKLRWTGPGRKRGPWRAMLMAFADQAARARPDLRLRDGPDAQEQRTARWIGLGVAGV CCHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCHHHH AVGIMGVVFASGPSIWGALAGGWIGLTGGSIGAITYMHYARVEEPPRLDWISFAAREGQP HHHHHHHHHHCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC GELPAN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA