Click here to switch to the map view.

The map label for this gene is 89054164

Identifier: 89054164

GI number: 89054164

Start: 1656030

End: 1656728

Strand: Reverse

Name: 89054164

Synonym: Jann_1673

Alternate gene names: NA

Gene position: 1656728-1656030 (Counterclockwise)

Preceding gene: 89054166

Following gene: 89054159

Centisome position: 38.37

GC content: 62.23

Gene sequence:

>699_bases
ATGGAATTAACGATCTGGTCGGCCTCGGGTCTCATCGGGGTTGCCCTTTACCTTTCGGCCTATGGCGGGTTGCAGTTTGG
CCTGTTGCGCGGCAGCTCGGCTACCTACACGATCATGAACATGCTCGCTGCGATGGCGGTGCTGGTCAGCATTGTGGAGG
CGTTCAACCTGTCGTCGATGCTGATTCAGATCTCCTGGATCACCCTATCCGTGATCGGCCTGGCGCGTATGGCCTGGACC
CGGGCAAAGGTGCGCTTTTCCGAGGAGGAGACATCCTTTCTCGCCGCCCATTTCAGTACGCTGTCGCCCCATCTGGCCCG
CAAGTTCCTGCAGCTGGGAACCTGGCAGACCGTCAGCCCCGGTACGATCCTCGCCCGCCAGGGCACACCCGTGCACGAGT
TGGTCTATGTCGGACAGGGCAACGCCGAGGTTCACGCGCACGGGGCGACCGTGGCCACAATCGGCCCGACCGCGTTGATC
GGAGAGATGACGATCATGCATGGCGGCGAGGCCACCGCCGATGTTGAGATCACGTCAGAGGCGCGCATTTTTACCCTGCC
CCGCGCCGCCCTGATGCGAGAGTTGGAGATGGACCACGATTTCGCGCTGGCCGTCTCGAACGCCCTGCAAATCGAAGCGC
AGCGCAAAATCGAGGCGGCAAACCGGGAACGCGCCGGGATGGCGGTCGAGATAGGTTAA

Upstream 100 bases:

>100_bases
CCCTTCCAATGTCGAAGATGGATTTGACATCCGGCGATGGGTCAGTCCACCCTCCGCGTCGACACGGCGCTCTCCTTCAG
CCTAAAGGACTACGCTGCTT

Downstream 100 bases:

>100_bases
CGGCGTTAACTAGTGGCCTCTAGCGGTCGGCCGCACGCGCCATCGGCACTGAATCCGCCACCTTCCGCGCCAACTCGGTC
CCGAAAAGCGCAATCATCGC

Product: cyclic nucleotide-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MELTIWSASGLIGVALYLSAYGGLQFGLLRGSSATYTIMNMLAAMAVLVSIVEAFNLSSMLIQISWITLSVIGLARMAWT
RAKVRFSEEETSFLAAHFSTLSPHLARKFLQLGTWQTVSPGTILARQGTPVHELVYVGQGNAEVHAHGATVATIGPTALI
GEMTIMHGGEATADVEITSEARIFTLPRAALMRELEMDHDFALAVSNALQIEAQRKIEAANRERAGMAVEIG

Sequences:

>Translated_232_residues
MELTIWSASGLIGVALYLSAYGGLQFGLLRGSSATYTIMNMLAAMAVLVSIVEAFNLSSMLIQISWITLSVIGLARMAWT
RAKVRFSEEETSFLAAHFSTLSPHLARKFLQLGTWQTVSPGTILARQGTPVHELVYVGQGNAEVHAHGATVATIGPTALI
GEMTIMHGGEATADVEITSEARIFTLPRAALMRELEMDHDFALAVSNALQIEAQRKIEAANRERAGMAVEIG
>Mature_232_residues
MELTIWSASGLIGVALYLSAYGGLQFGLLRGSSATYTIMNMLAAMAVLVSIVEAFNLSSMLIQISWITLSVIGLARMAWT
RAKVRFSEEETSFLAAHFSTLSPHLARKFLQLGTWQTVSPGTILARQGTPVHELVYVGQGNAEVHAHGATVATIGPTALI
GEMTIMHGGEATADVEITSEARIFTLPRAALMRELEMDHDFALAVSNALQIEAQRKIEAANRERAGMAVEIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24959; Mature: 24959

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTIWSASGLIGVALYLSAYGGLQFGLLRGSSATYTIMNMLAAMAVLVSIVEAFNLSSM
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
LIQISWITLSVIGLARMAWTRAKVRFSEEETSFLAAHFSTLSPHLARKFLQLGTWQTVSP
HEEEHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
GTILARQGTPVHELVYVGQGNAEVHAHGATVATIGPTALIGEMTIMHGGEATADVEITSE
CEEEEECCCCHHHEEEEECCCCEEEECCCEEEECCCHHHHHEEEEEECCCCEEEEEEECC
ARIFTLPRAALMRELEMDHDFALAVSNALQIEAQRKIEAANRERAGMAVEIG
CEEEECCHHHHHHHHCCCCCCEEEEHHHHEEHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MELTIWSASGLIGVALYLSAYGGLQFGLLRGSSATYTIMNMLAAMAVLVSIVEAFNLSSM
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
LIQISWITLSVIGLARMAWTRAKVRFSEEETSFLAAHFSTLSPHLARKFLQLGTWQTVSP
HEEEHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
GTILARQGTPVHELVYVGQGNAEVHAHGATVATIGPTALIGEMTIMHGGEATADVEITSE
CEEEEECCCCHHHEEEEECCCCEEEECCCEEEECCCHHHHHEEEEEECCCCEEEEEEECC
ARIFTLPRAALMRELEMDHDFALAVSNALQIEAQRKIEAANRERAGMAVEIG
CEEEECCHHHHHHHHCCCCCCEEEEHHHHEEHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA