Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054166

Identifier: 89054166

GI number: 89054166

Start: 1659122

End: 1660012

Strand: Reverse

Name: 89054166

Synonym: Jann_1675

Alternate gene names: NA

Gene position: 1660012-1659122 (Counterclockwise)

Preceding gene: 89054167

Following gene: 89054164

Centisome position: 38.44

GC content: 65.1

Gene sequence:

>891_bases
ATGCCCTTCAAGACATTCAAGATCGCCGCAGTGGCGGCCCTCGCCCTTGCGGCCCCGTTTGCAGCCCCGGTCGCCGCGCA
AAACATCGGGACCGTTGCCTCGACCGAGCCGACGCTGCGCGGCACGCCGCCCGGCGCGGGCACACGTCCCCTGACCCTCG
GCACCGGCGTCGTCCAGAACGAGACGGTGGCCGCATCCGCCTCGGGCCGTGGTCAGATCCTGTTTATCGACCAGTCGACC
CTGTCGCTAGCCCCGAACACCACGATTGTGCTCGACCAGTTCGTCTTCAACCCCAATGGCTCCGGCCAGATGGGTCTGTC
GATGACCGAAGGCGCGCTGCGCTTCATCGGCGGCACGCTGTCGCGCGGGCAAGAGGCGACGGTCACGACGCCCACAGCCA
CCATCGGCATCCGTGGGTCCAGCGCGCTGATCGTTCACCTGAACGGACAAACGGTCGCTGTTTTTCTGGCTGGAGAGCGG
TTGTGCCTCTACACGGCCGGCGGACAGCGCGCCTGCACCAGCCGACGCGGCGGTGTTCTGACGGTCGAAGGCTATCAGGG
CCGCGTGAACCCTGATTATCTGGCGCAGATCCTGTCCCTGATTGACGGCGCGCCACAGGGCGGCAGTGGCTCGGGTCTTG
GGTCAGGGGTCGGCGGGCCCAACCCTTCGGATCGCGGTCCGGTCTCCACCGGCGGTGAGGAATTCGATCCAGAAATCTTC
GACGATGACTTCCGCGAAGATGATCTGTTCCTTGGCCTGCCCGAGCAACAGATGGAGATGGAAGAGGTGATATTGGACGA
TGCAGTTATGGATCCTATGCCGACGACGCCGACCAATTGCGACCCCCAGGACCCGGCGCCGGGGTGTTTCGGAACGCCGA
CTTTCCCGTAA

Upstream 100 bases:

>100_bases
CCGCCGCCGCGCAGGTCAATGAAGATACTCTGTCGGGCGGCACCACCACAACGCGCGAAGAGATGATTTACACGTTCCAA
GTCGGTTGGGAGTTCTGAGC

Downstream 100 bases:

>100_bases
GGATCTATCTTTTTGACAAGGCGACGAATTCCCCCTGCCAGCCCTCTGGCGGGGGGATTTCTTTATAGGCGGCGATCCGG
TCGAGGTAGAGCTGCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPFKTFKIAAVAALALAAPFAAPVAAQNIGTVASTEPTLRGTPPGAGTRPLTLGTGVVQNETVAASASGRGQILFIDQST
LSLAPNTTIVLDQFVFNPNGSGQMGLSMTEGALRFIGGTLSRGQEATVTTPTATIGIRGSSALIVHLNGQTVAVFLAGER
LCLYTAGGQRACTSRRGGVLTVEGYQGRVNPDYLAQILSLIDGAPQGGSGSGLGSGVGGPNPSDRGPVSTGGEEFDPEIF
DDDFREDDLFLGLPEQQMEMEEVILDDAVMDPMPTTPTNCDPQDPAPGCFGTPTFP

Sequences:

>Translated_296_residues
MPFKTFKIAAVAALALAAPFAAPVAAQNIGTVASTEPTLRGTPPGAGTRPLTLGTGVVQNETVAASASGRGQILFIDQST
LSLAPNTTIVLDQFVFNPNGSGQMGLSMTEGALRFIGGTLSRGQEATVTTPTATIGIRGSSALIVHLNGQTVAVFLAGER
LCLYTAGGQRACTSRRGGVLTVEGYQGRVNPDYLAQILSLIDGAPQGGSGSGLGSGVGGPNPSDRGPVSTGGEEFDPEIF
DDDFREDDLFLGLPEQQMEMEEVILDDAVMDPMPTTPTNCDPQDPAPGCFGTPTFP
>Mature_295_residues
PFKTFKIAAVAALALAAPFAAPVAAQNIGTVASTEPTLRGTPPGAGTRPLTLGTGVVQNETVAASASGRGQILFIDQSTL
SLAPNTTIVLDQFVFNPNGSGQMGLSMTEGALRFIGGTLSRGQEATVTTPTATIGIRGSSALIVHLNGQTVAVFLAGERL
CLYTAGGQRACTSRRGGVLTVEGYQGRVNPDYLAQILSLIDGAPQGGSGSGLGSGVGGPNPSDRGPVSTGGEEFDPEIFD
DDFREDDLFLGLPEQQMEMEEVILDDAVMDPMPTTPTNCDPQDPAPGCFGTPTFP

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30402; Mature: 30270

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFKTFKIAAVAALALAAPFAAPVAAQNIGTVASTEPTLRGTPPGAGTRPLTLGTGVVQN
CCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
ETVAASASGRGQILFIDQSTLSLAPNTTIVLDQFVFNPNGSGQMGLSMTEGALRFIGGTL
CEEEECCCCCEEEEEEECCCEEECCCCEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHH
SRGQEATVTTPTATIGIRGSSALIVHLNGQTVAVFLAGERLCLYTAGGQRACTSRRGGVL
CCCCCEEEECCCEEEEECCCCEEEEEECCCEEEEEEECCEEEEEECCCCHHHHCCCCCEE
TVEGYQGRVNPDYLAQILSLIDGAPQGGSGSGLGSGVGGPNPSDRGPVSTGGEEFDPEIF
EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDDFREDDLFLGLPEQQMEMEEVILDDAVMDPMPTTPTNCDPQDPAPGCFGTPTFP
CCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PFKTFKIAAVAALALAAPFAAPVAAQNIGTVASTEPTLRGTPPGAGTRPLTLGTGVVQN
CCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
ETVAASASGRGQILFIDQSTLSLAPNTTIVLDQFVFNPNGSGQMGLSMTEGALRFIGGTL
CEEEECCCCCEEEEEEECCCEEECCCCEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHH
SRGQEATVTTPTATIGIRGSSALIVHLNGQTVAVFLAGERLCLYTAGGQRACTSRRGGVL
CCCCCEEEECCCEEEEECCCCEEEEEECCCEEEEEEECCEEEEEECCCCHHHHCCCCCEE
TVEGYQGRVNPDYLAQILSLIDGAPQGGSGSGLGSGVGGPNPSDRGPVSTGGEEFDPEIF
EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDDFREDDLFLGLPEQQMEMEEVILDDAVMDPMPTTPTNCDPQDPAPGCFGTPTFP
CCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA