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The map label for this gene is argS

Identifier: 89053998

GI number: 89053998

Start: 1476738

End: 1478465

Strand: Direct

Name: argS

Synonym: Jann_1507

Alternate gene names: 89053998

Gene position: 1476738-1478465 (Clockwise)

Preceding gene: 89053997

Following gene: 89053999

Centisome position: 34.2

GC content: 60.13

Gene sequence:

>1728_bases
ATGACCCTCTTCGCCGAGATCCGCGATACCGTTTTGGCCGCTATTGATACGCTCGTGGCTGATAATGTGCTGCCTTCTGG
GCTGGAAATGCGCGCCGTCACGGTGGAGCCGCCGCGCGATGCCTCCCACGGGGATATGGCGACGAATGCCGCGATGGTGC
TGGCCAAACCCGCAGGCATGAAGCCACGCGATATAGCGGAGGCTTTGGCCGCCAAGCTGGCCGATGACGCGCGGATCGAC
ACCGTTGACGTCGCCGGGCCGGGCTTCCTGAACCTGCGCCTGTCGGGGGATGTTTGGCGCGGCGTGATCGCGGACGCTCT
GACCCAGGGCGAGGCTTATGGGCGGTCGAAAATCGGCGCGGGTAAGCGGGTAAACGTCGAATATGTCAGCGCAAATCCCA
CTGGCCCGTTGCATGTGGGCCACACGCGGGGGGCGGTGTTTGGCGATGCATTGGCCTCGCTTCTGGACGTTGCTGGCTAT
GACGTGACGCGGGAATACTACATCAACGACGGCGGTGCGCAGGTCGATGTTCTCGTGCGGTCGGTCTATCTGCGCTACCT
GGAAGCGCACGGCCAAGACGTCGCATTTGAGGATGGAACCTATCCCGGCGACTATCTGATCGACGTGGGACAGGCGCTAA
AGGACAAGGTCGGCGACGCGTTCGTCGACAAGGGAGAGCAGTTCTGGCTGGCCGAGATCCGGGAGTTCGCGACCGAACAG
ATGATGGATCTGATCCGTAAGGATCTGGCCCTGCTCGGCGTCGAAATGGATGTCTTCTACAGTGAAAAATCGCTCTACGG
GACGGGCCGGATCGAGGCGGCGATTGACGATCTGCGCGGCAAGGGCCTGATCTATGAAGGCTATCTTGAGCCGCCAAAAG
GCAAGACACCCGAGGATTGGGAGCCGCGCGAACAGACGCTGTTCAAGTCGACCGAACATGGCGACGATGTGGACCGCCCG
GTGATGAAGTCCGACGGCTCCTGGACCTACTTCGCGCCGGACATCGCCTATCATTTTGATAAGGTTTCCAGGGGGTTCGA
TGAATTGATCGACGTGTTTGGCGCGGATCACGGTGGCTACGTCAAGCGGATGAAGGCGGCCGTGTCTGCGCTGTCGGGCG
GTGACGTTCCGCTGGATGTGAAGTTGACGCAGCTGGTGAAATTGCGGCGCGGTGACGAAGAGCTGAAGATGTCCAAACGG
GCAGGGACCTTCGTGACGCTCGCCGATGTGGTGGAGATGGTGGGCGCGGATGTGACCCGGTTCCACATGCTGACCCGCAA
GAACGACGCACCCCTTGATTTCGACGTCGACAAAGTGCGCGAGCAGTCGAAAGACAACCCGGTGTGGTACGTGCAATACG
CCCATGCGCGGATCAAATCCGTCCTGCGCAAGGCGGAGGAGGCGGGCATGTCGCCCGATCCCGCAAACCTTAACGCTGTT
AACGATCCGGCAGAACTGGCGCTGGCGGCAAAAATCGCCGAATACCCGCGCCTGATCGAGATCGCCGCAAAGGGAAATGA
GCCGCACCGCGTGGCCTTCTACCTCTTTGATCTGGCTTCCGATTTTCACGGGCTCTGGAACAAGGGCAACGCAGAGACGC
ATCTGCGCTTCTTTCAGGATGATGACCCATCGGCCACATCCGGTAAATTGTGCCTGATTTCCGCCGTGGCGATTGTCATT
TCAAACGGTCTTGGTATTTTGGGTGTCACTCCGGTCGATCAGATGTGA

Upstream 100 bases:

>100_bases
CAACGCCTACACCTATTCGCGATGCGAGCCCTGACCGGCTCTGATTGACCACGGCGCGCGGCGTGATAAACGCACGGGTG
ATCTTCAAAGGACCCGTGAC

Downstream 100 bases:

>100_bases
GGCACAAGACCTCTCCCGGCCCGGACGTCACAGGCAATAAATGATCCGCGGCTCAGTGCCCGGACGATGAGGCGGGCATG
GCAGATATCCAATATACCGG

Product: arginyl-tRNA synthetase

Products: NA

Alternate protein names: Arginine--tRNA ligase; ArgRS

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MTLFAEIRDTVLAAIDTLVADNVLPSGLEMRAVTVEPPRDASHGDMATNAAMVLAKPAGMKPRDIAEALAAKLADDARID
TVDVAGPGFLNLRLSGDVWRGVIADALTQGEAYGRSKIGAGKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDVAGY
DVTREYYINDGGAQVDVLVRSVYLRYLEAHGQDVAFEDGTYPGDYLIDVGQALKDKVGDAFVDKGEQFWLAEIREFATEQ
MMDLIRKDLALLGVEMDVFYSEKSLYGTGRIEAAIDDLRGKGLIYEGYLEPPKGKTPEDWEPREQTLFKSTEHGDDVDRP
VMKSDGSWTYFAPDIAYHFDKVSRGFDELIDVFGADHGGYVKRMKAAVSALSGGDVPLDVKLTQLVKLRRGDEELKMSKR
AGTFVTLADVVEMVGADVTRFHMLTRKNDAPLDFDVDKVREQSKDNPVWYVQYAHARIKSVLRKAEEAGMSPDPANLNAV
NDPAELALAAKIAEYPRLIEIAAKGNEPHRVAFYLFDLASDFHGLWNKGNAETHLRFFQDDDPSATSGKLCLISAVAIVI
SNGLGILGVTPVDQM

Sequences:

>Translated_575_residues
MTLFAEIRDTVLAAIDTLVADNVLPSGLEMRAVTVEPPRDASHGDMATNAAMVLAKPAGMKPRDIAEALAAKLADDARID
TVDVAGPGFLNLRLSGDVWRGVIADALTQGEAYGRSKIGAGKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDVAGY
DVTREYYINDGGAQVDVLVRSVYLRYLEAHGQDVAFEDGTYPGDYLIDVGQALKDKVGDAFVDKGEQFWLAEIREFATEQ
MMDLIRKDLALLGVEMDVFYSEKSLYGTGRIEAAIDDLRGKGLIYEGYLEPPKGKTPEDWEPREQTLFKSTEHGDDVDRP
VMKSDGSWTYFAPDIAYHFDKVSRGFDELIDVFGADHGGYVKRMKAAVSALSGGDVPLDVKLTQLVKLRRGDEELKMSKR
AGTFVTLADVVEMVGADVTRFHMLTRKNDAPLDFDVDKVREQSKDNPVWYVQYAHARIKSVLRKAEEAGMSPDPANLNAV
NDPAELALAAKIAEYPRLIEIAAKGNEPHRVAFYLFDLASDFHGLWNKGNAETHLRFFQDDDPSATSGKLCLISAVAIVI
SNGLGILGVTPVDQM
>Mature_574_residues
TLFAEIRDTVLAAIDTLVADNVLPSGLEMRAVTVEPPRDASHGDMATNAAMVLAKPAGMKPRDIAEALAAKLADDARIDT
VDVAGPGFLNLRLSGDVWRGVIADALTQGEAYGRSKIGAGKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDVAGYD
VTREYYINDGGAQVDVLVRSVYLRYLEAHGQDVAFEDGTYPGDYLIDVGQALKDKVGDAFVDKGEQFWLAEIREFATEQM
MDLIRKDLALLGVEMDVFYSEKSLYGTGRIEAAIDDLRGKGLIYEGYLEPPKGKTPEDWEPREQTLFKSTEHGDDVDRPV
MKSDGSWTYFAPDIAYHFDKVSRGFDELIDVFGADHGGYVKRMKAAVSALSGGDVPLDVKLTQLVKLRRGDEELKMSKRA
GTFVTLADVVEMVGADVTRFHMLTRKNDAPLDFDVDKVREQSKDNPVWYVQYAHARIKSVLRKAEEAGMSPDPANLNAVN
DPAELALAAKIAEYPRLIEIAAKGNEPHRVAFYLFDLASDFHGLWNKGNAETHLRFFQDDDPSATSGKLCLISAVAIVIS
NGLGILGVTPVDQM

Specific function: Unknown

COG id: COG0018

COG function: function code J; Arginyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family

Homologues:

Organism=Homo sapiens, GI15149476, Length=604, Percent_Identity=24.6688741721854, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI197100773, Length=555, Percent_Identity=24.8648648648649, Blast_Score=99, Evalue=7e-21,
Organism=Escherichia coli, GI1788184, Length=577, Percent_Identity=24.7833622183709, Blast_Score=122, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI71985061, Length=600, Percent_Identity=24.1666666666667, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985068, Length=553, Percent_Identity=24.4122965641953, Blast_Score=91, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320548, Length=574, Percent_Identity=26.3066202090592, Blast_Score=132, Evalue=1e-31,
Organism=Drosophila melanogaster, GI18859963, Length=592, Percent_Identity=23.6486486486486, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571570, Length=512, Percent_Identity=25.78125, Blast_Score=90, Evalue=5e-18,

Paralogues:

None

Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYR_JANSC (Q28S88)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_509449.1
- ProteinModelPortal:   Q28S88
- STRING:   Q28S88
- GeneID:   3933954
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_1507
- eggNOG:   COG0018
- HOGENOM:   HBG695395
- OMA:   FDVYFHE
- ProtClustDB:   PRK01611
- BioCyc:   JSP290400:JANN_1507-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00123
- InterPro:   IPR001412
- InterPro:   IPR001278
- InterPro:   IPR015945
- InterPro:   IPR005148
- InterPro:   IPR008909
- InterPro:   IPR014729
- InterPro:   IPR009080
- Gene3D:   G3DSA:3.30.1360.70
- Gene3D:   G3DSA:3.40.50.620
- PANTHER:   PTHR11956
- PRINTS:   PR01038
- SMART:   SM00836
- TIGRFAMs:   TIGR00456

Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d; SSF55190 Arg-tRNA-synth_Ic_N; SSF47323 tRNAsyn_1a_bind

EC number: =6.1.1.19

Molecular weight: Translated: 62835; Mature: 62704

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFAEIRDTVLAAIDTLVADNVLPSGLEMRAVTVEPPRDASHGDMATNAAMVLAKPAGM
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
KPRDIAEALAAKLADDARIDTVDVAGPGFLNLRLSGDVWRGVIADALTQGEAYGRSKIGA
CHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHCCCCCCCC
GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDVAGYDVTREYYINDGGAQVDVLVR
CCEEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
SVYLRYLEAHGQDVAFEDGTYPGDYLIDVGQALKDKVGDAFVDKGEQFWLAEIREFATEQ
HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHH
MMDLIRKDLALLGVEMDVFYSEKSLYGTGRIEAAIDDLRGKGLIYEGYLEPPKGKTPEDW
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
EPREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHFDKVSRGFDELIDVFGADHGGY
CCHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCHH
VKRMKAAVSALSGGDVPLDVKLTQLVKLRRGDEELKMSKRAGTFVTLADVVEMVGADVTR
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHHHHHCCCHHH
FHMLTRKNDAPLDFDVDKVREQSKDNPVWYVQYAHARIKSVLRKAEEAGMSPDPANLNAV
HHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NDPAELALAAKIAEYPRLIEIAAKGNEPHRVAFYLFDLASDFHGLWNKGNAETHLRFFQD
CCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEEEC
DDPSATSGKLCLISAVAIVISNGLGILGVTPVDQM
CCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
TLFAEIRDTVLAAIDTLVADNVLPSGLEMRAVTVEPPRDASHGDMATNAAMVLAKPAGM
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
KPRDIAEALAAKLADDARIDTVDVAGPGFLNLRLSGDVWRGVIADALTQGEAYGRSKIGA
CHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHCCCCCCCC
GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDVAGYDVTREYYINDGGAQVDVLVR
CCEEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
SVYLRYLEAHGQDVAFEDGTYPGDYLIDVGQALKDKVGDAFVDKGEQFWLAEIREFATEQ
HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHH
MMDLIRKDLALLGVEMDVFYSEKSLYGTGRIEAAIDDLRGKGLIYEGYLEPPKGKTPEDW
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
EPREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHFDKVSRGFDELIDVFGADHGGY
CCHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCHH
VKRMKAAVSALSGGDVPLDVKLTQLVKLRRGDEELKMSKRAGTFVTLADVVEMVGADVTR
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHHHHHCCCHHH
FHMLTRKNDAPLDFDVDKVREQSKDNPVWYVQYAHARIKSVLRKAEEAGMSPDPANLNAV
HHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NDPAELALAAKIAEYPRLIEIAAKGNEPHRVAFYLFDLASDFHGLWNKGNAETHLRFFQD
CCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEEEC
DDPSATSGKLCLISAVAIVISNGLGILGVTPVDQM
CCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA