Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053997

Identifier: 89053997

GI number: 89053997

Start: 1476306

End: 1476671

Strand: Direct

Name: 89053997

Synonym: Jann_1506

Alternate gene names: NA

Gene position: 1476306-1476671 (Clockwise)

Preceding gene: 89053996

Following gene: 89053998

Centisome position: 34.19

GC content: 59.84

Gene sequence:

>366_bases
ATGCCTCTCCCTCTGCGCCACGCCGCCCCTTTGGCGGTCCTTCTCGCGACCCTGACCGCGGCCCAGGCCTTCCCGCAAGA
TGGCCTTTTCTATCAAGGTTTTAGCTGCCCTGCCGATGGATTTGAACCCGGTGGTGAACGGACGGCATCGCTGGCCTTCC
CGACCCTGTGTCTGGTTGAGCAATGCTGTGATCTGTCTAACCCCGTGAATGTCCGGGCCATGGATCAGATCTTTTTATAT
GACGGGGCCTGCACGTCTGAGGGCACTGAATTTGAGGCCCGGCTTTTGGTGGGCGAGGCGTCCGTTGACGGGCTGGTCGT
GGTCATCAACAACAACGCCTACACCTATTCGCGATGCGAGCCCTGA

Upstream 100 bases:

>100_bases
TGACCGACCGTTTCGCCCTGCAATGCCACCAGAGGTTGATCGGTGGCGCGCAAGACGGCACAGTGACCGGGCCCTCCACG
CTCAATTTCGGAGCCTGAAT

Downstream 100 bases:

>100_bases
CCGGCTCTGATTGACCACGGCGCGCGGCGTGATAAACGCACGGGTGATCTTCAAAGGACCCGTGACATGACCCTCTTCGC
CGAGATCCGCGATACCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPLPLRHAAPLAVLLATLTAAQAFPQDGLFYQGFSCPADGFEPGGERTASLAFPTLCLVEQCCDLSNPVNVRAMDQIFLY
DGACTSEGTEFEARLLVGEASVDGLVVVINNNAYTYSRCEP

Sequences:

>Translated_121_residues
MPLPLRHAAPLAVLLATLTAAQAFPQDGLFYQGFSCPADGFEPGGERTASLAFPTLCLVEQCCDLSNPVNVRAMDQIFLY
DGACTSEGTEFEARLLVGEASVDGLVVVINNNAYTYSRCEP
>Mature_120_residues
PLPLRHAAPLAVLLATLTAAQAFPQDGLFYQGFSCPADGFEPGGERTASLAFPTLCLVEQCCDLSNPVNVRAMDQIFLYD
GACTSEGTEFEARLLVGEASVDGLVVVINNNAYTYSRCEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12935; Mature: 12804

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLRHAAPLAVLLATLTAAQAFPQDGLFYQGFSCPADGFEPGGERTASLAFPTLCLVE
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHH
QCCDLSNPVNVRAMDQIFLYDGACTSEGTEFEARLLVGEASVDGLVVVINNNAYTYSRCE
HHHCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEECCCC
P
C
>Mature Secondary Structure 
PLPLRHAAPLAVLLATLTAAQAFPQDGLFYQGFSCPADGFEPGGERTASLAFPTLCLVE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHH
QCCDLSNPVNVRAMDQIFLYDGACTSEGTEFEARLLVGEASVDGLVVVINNNAYTYSRCE
HHHCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEECCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA