| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053999
Identifier: 89053999
GI number: 89053999
Start: 1478543
End: 1479571
Strand: Direct
Name: 89053999
Synonym: Jann_1508
Alternate gene names: NA
Gene position: 1478543-1479571 (Clockwise)
Preceding gene: 89053998
Following gene: 89054000
Centisome position: 34.24
GC content: 66.47
Gene sequence:
>1029_bases ATGGCAGATATCCAATATACCGGGAATGATCCGGACGCGTATTCCTCCTATGGGGCGTATGATCACGCGGCTCAACACGG CGCGGCAACAGACGCATCGCGCGTCACGCAATTGATCAACTGGACGGGCGCCTTGGTGTCCATGGGACTGGTGATCGGCA TGGGCGTGTGGGCGTTTCAGCTTCTGGTGCGCGACGTGGCCGATGTGCCGGTGATCCGCGCGCTGGACGGCCCGATGCGG GTGGCACCGGAAAATCCGGGCGGATCTATCGCGGAAAATCAAGGGCTTGCGGTGAACCGTCTGGCTGAAGGGGCGGAAGC TGCGCCGGTGCCGGATCAGCTGTTGCTGGCCCCCCCGCCGCAGGATCTGAGCGCCGTGGACCTGGACGGCACAACGGAAG ACACACCCGAAGAGCAGGCGTTTGAGAATGCCTCCGCCGCGCTGCCCGACATCGACGCCGAGGTCGTGCCCGAGGTTGTC GAAGAGGTCGACACCGACGCGCTGATCGCGCGCCTCCTACAGGAAGCGGTGCCGCTGACGGACATGGACGCGCCAGTGCT GGAAGATGACCCAACCGCCATCGGAGAGCCCGCCGTAGACCTTGTGGCGCGGGCGCAGACGATCCCGCTGTCGACCCCCG GTGTGCGTCGCTCCCCCCGTCCGTCCTTGCGCCCGGCAAGCCTTTCAAGGCCCGCGCCAGCGCCTGCGACGCAGGATGGG GCCCAAGGCATCACCGATGATGCCAGCGGGTTCGAGATGGCGGCGGCTGAACTGGAGGCCGGCACCCGTCTTGTCCAGCT TGGCGCATTCGATACGCCGGACCTCGCCCGCTCGGAATGGGAGCGGTTGTCGGGCAACTTCCCGGACTTCTTCCTGGGCC GCGCCCGTGTGATCGAAGAAGCGTCATCGGGCGGGGCCACGTTCTACCGCCTGCGCGCCCATGGCTTCAGCGATTTGTCG GCCTCCCGCCGCTTCTGCGCGGCACTTGTCGCCCAAGGATCGGCCTGCATTCCGGTCACCGTTCGCTGA
Upstream 100 bases:
>100_bases TCACTCCGGTCGATCAGATGTGAGGCACAAGACCTCTCCCGGCCCGGACGTCACAGGCAATAAATGATCCGCGGCTCAGT GCCCGGACGATGAGGCGGGC
Downstream 100 bases:
>100_bases CATGGCGACCTCTGCCAGCATTCTTGGATGCGAGGGGCTGACCCTGTCGGCCTCCGAGAAGGCGTTCTTTGCCGAGGCGC GTCCATGGGGGTTCATCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation And Repeat Protein; Sporulation Domain-Containing Protein; Sporulation
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MADIQYTGNDPDAYSSYGAYDHAAQHGAATDASRVTQLINWTGALVSMGLVIGMGVWAFQLLVRDVADVPVIRALDGPMR VAPENPGGSIAENQGLAVNRLAEGAEAAPVPDQLLLAPPPQDLSAVDLDGTTEDTPEEQAFENASAALPDIDAEVVPEVV EEVDTDALIARLLQEAVPLTDMDAPVLEDDPTAIGEPAVDLVARAQTIPLSTPGVRRSPRPSLRPASLSRPAPAPATQDG AQGITDDASGFEMAAAELEAGTRLVQLGAFDTPDLARSEWERLSGNFPDFFLGRARVIEEASSGGATFYRLRAHGFSDLS ASRRFCAALVAQGSACIPVTVR
Sequences:
>Translated_342_residues MADIQYTGNDPDAYSSYGAYDHAAQHGAATDASRVTQLINWTGALVSMGLVIGMGVWAFQLLVRDVADVPVIRALDGPMR VAPENPGGSIAENQGLAVNRLAEGAEAAPVPDQLLLAPPPQDLSAVDLDGTTEDTPEEQAFENASAALPDIDAEVVPEVV EEVDTDALIARLLQEAVPLTDMDAPVLEDDPTAIGEPAVDLVARAQTIPLSTPGVRRSPRPSLRPASLSRPAPAPATQDG AQGITDDASGFEMAAAELEAGTRLVQLGAFDTPDLARSEWERLSGNFPDFFLGRARVIEEASSGGATFYRLRAHGFSDLS ASRRFCAALVAQGSACIPVTVR >Mature_341_residues ADIQYTGNDPDAYSSYGAYDHAAQHGAATDASRVTQLINWTGALVSMGLVIGMGVWAFQLLVRDVADVPVIRALDGPMRV APENPGGSIAENQGLAVNRLAEGAEAAPVPDQLLLAPPPQDLSAVDLDGTTEDTPEEQAFENASAALPDIDAEVVPEVVE EVDTDALIARLLQEAVPLTDMDAPVLEDDPTAIGEPAVDLVARAQTIPLSTPGVRRSPRPSLRPASLSRPAPAPATQDGA QGITDDASGFEMAAAELEAGTRLVQLGAFDTPDLARSEWERLSGNFPDFFLGRARVIEEASSGGATFYRLRAHGFSDLSA SRRFCAALVAQGSACIPVTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35892; Mature: 35761
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIQYTGNDPDAYSSYGAYDHAAQHGAATDASRVTQLINWTGALVSMGLVIGMGVWAFQ CCCCEECCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVRDVADVPVIRALDGPMRVAPENPGGSIAENQGLAVNRLAEGAEAAPVPDQLLLAPPP HHHHHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCC QDLSAVDLDGTTEDTPEEQAFENASAALPDIDAEVVPEVVEEVDTDALIARLLQEAVPLT CCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC DMDAPVLEDDPTAIGEPAVDLVARAQTIPLSTPGVRRSPRPSLRPASLSRPAPAPATQDG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQGITDDASGFEMAAAELEAGTRLVQLGAFDTPDLARSEWERLSGNFPDFFLGRARVIEE CCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH ASSGGATFYRLRAHGFSDLSASRRFCAALVAQGSACIPVTVR HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure ADIQYTGNDPDAYSSYGAYDHAAQHGAATDASRVTQLINWTGALVSMGLVIGMGVWAFQ CCCEECCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVRDVADVPVIRALDGPMRVAPENPGGSIAENQGLAVNRLAEGAEAAPVPDQLLLAPPP HHHHHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCC QDLSAVDLDGTTEDTPEEQAFENASAALPDIDAEVVPEVVEEVDTDALIARLLQEAVPLT CCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC DMDAPVLEDDPTAIGEPAVDLVARAQTIPLSTPGVRRSPRPSLRPASLSRPAPAPATQDG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQGITDDASGFEMAAAELEAGTRLVQLGAFDTPDLARSEWERLSGNFPDFFLGRARVIEE CCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH ASSGGATFYRLRAHGFSDLSASRRFCAALVAQGSACIPVTVR HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA