| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053986
Identifier: 89053986
GI number: 89053986
Start: 1466907
End: 1467161
Strand: Reverse
Name: 89053986
Synonym: Jann_1495
Alternate gene names: NA
Gene position: 1467161-1466907 (Counterclockwise)
Preceding gene: 89053987
Following gene: 89053985
Centisome position: 33.98
GC content: 58.82
Gene sequence:
>255_bases ATGAGTGATGTCATCGCCGCCCACAAACATTGCATCCGGCATCGACCTGAGGTCGAAGCAAGCAATAGCGTTGGCTGTTT CTCCTGCCTTGCGATCTATCAACCTGACCTGATCGTCGACTGGGTCGCAGATACCCCGACCGAGACCGCGATCTGCCCTC ACTGCGGCATCGACAGCGTGATCGGCGATGCGTCCGGCCACCCCGTCACACCCGACTTCCTTGGCAAGATGAACGCGCAT TGGTTCCGGACATGA
Upstream 100 bases:
>100_bases TCGACGGCCTCTATATTCGCCACGCTTTGGCCGACCTGGGCCCGCCAAACGCAGAGGCGGCCATTGCCCGCGTCACCGAT TATCTGGAAGTCGCGATCCG
Downstream 100 bases:
>100_bases CCCAACCTAACATCCTGATAGTAATGGTGGATCAGTTGAACGGCACGTTGTTCCCGGACGGCCCGGCGGACTGGCTGCAC ACGCCCAATCTGGACCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSDVIAAHKHCIRHRPEVEASNSVGCFSCLAIYQPDLIVDWVADTPTETAICPHCGIDSVIGDASGHPVTPDFLGKMNAH WFRT
Sequences:
>Translated_84_residues MSDVIAAHKHCIRHRPEVEASNSVGCFSCLAIYQPDLIVDWVADTPTETAICPHCGIDSVIGDASGHPVTPDFLGKMNAH WFRT >Mature_83_residues SDVIAAHKHCIRHRPEVEASNSVGCFSCLAIYQPDLIVDWVADTPTETAICPHCGIDSVIGDASGHPVTPDFLGKMNAHW FRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9160; Mature: 9029
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVIAAHKHCIRHRPEVEASNSVGCFSCLAIYQPDLIVDWVADTPTETAICPHCGIDSV CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC IGDASGHPVTPDFLGKMNAHWFRT CCCCCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure SDVIAAHKHCIRHRPEVEASNSVGCFSCLAIYQPDLIVDWVADTPTETAICPHCGIDSV CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC IGDASGHPVTPDFLGKMNAHWFRT CCCCCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA