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The map label for this gene is betI [H]

Identifier: 89053987

GI number: 89053987

Start: 1467158

End: 1467730

Strand: Reverse

Name: betI [H]

Synonym: Jann_1496

Alternate gene names: 89053987

Gene position: 1467730-1467158 (Counterclockwise)

Preceding gene: 89053993

Following gene: 89053986

Centisome position: 33.99

GC content: 64.75

Gene sequence:

>573_bases
ATGCCCCGCACAGGTATGATGGCTATACGGAAGGACGCGCTTGTCAACGCGACGATTGCCGAGATCGGGCGGCGGGGGTC
TCTGGACGTGACCATGGGGCAGATCGCCAAGGCAGCGGGCGTGTCTTCAGCGCTGGCGCATCATTATTTCGGCTCCAAGG
ACGATCTTTTGCTGGCGGCGATGCGGGCTATCCTGGCGGAGTTCGGGACGGAAGCGCGCGCGCAACTGGCCCGCGCGACG
ACCCCGATGGAGCGGTTGGTGGCCATCACCCGTGCCTCTTTCGGCGGGCAGAATTTCCGGCCCGAAGTCGTGGCGGCCTG
GCTCACCTTCTACGTCATGGCGCAACGGGACGATCAGGCCGCACGGCTGTTGCGCGTTTATCAGCACCGGCTGGTGTCCA
ATCTGACCCATGCGTTAAGGCCGTTAACCAATGACGCGCCGCGCATCGCCGCGACGGCCGCGGCGCTGATCGACGGCCTC
TATATTCGCCACGCTTTGGCCGACCTGGGCCCGCCAAACGCAGAGGCGGCCATTGCCCGCGTCACCGATTATCTGGAAGT
CGCGATCCGATGA

Upstream 100 bases:

>100_bases
GGGTCATTTTTGGTCTCCCGTTGATGTCTGGTCGTTTTTGTTGATTGACCAGTCAATTAAAAATCTATTTCTGGTGCATG
GCAACATGAAAGGTGTCGCG

Downstream 100 bases:

>100_bases
GTGATGTCATCGCCGCCCACAAACATTGCATCCGGCATCGACCTGAGGTCGAAGCAAGCAATAGCGTTGGCTGTTTCTCC
TGCCTTGCGATCTATCAACC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPRTGMMAIRKDALVNATIAEIGRRGSLDVTMGQIAKAAGVSSALAHHYFGSKDDLLLAAMRAILAEFGTEARAQLARAT
TPMERLVAITRASFGGQNFRPEVVAAWLTFYVMAQRDDQAARLLRVYQHRLVSNLTHALRPLTNDAPRIAATAAALIDGL
YIRHALADLGPPNAEAAIARVTDYLEVAIR

Sequences:

>Translated_190_residues
MPRTGMMAIRKDALVNATIAEIGRRGSLDVTMGQIAKAAGVSSALAHHYFGSKDDLLLAAMRAILAEFGTEARAQLARAT
TPMERLVAITRASFGGQNFRPEVVAAWLTFYVMAQRDDQAARLLRVYQHRLVSNLTHALRPLTNDAPRIAATAAALIDGL
YIRHALADLGPPNAEAAIARVTDYLEVAIR
>Mature_189_residues
PRTGMMAIRKDALVNATIAEIGRRGSLDVTMGQIAKAAGVSSALAHHYFGSKDDLLLAAMRAILAEFGTEARAQLARATT
PMERLVAITRASFGGQNFRPEVVAAWLTFYVMAQRDDQAARLLRVYQHRLVSNLTHALRPLTNDAPRIAATAAALIDGLY
IRHALADLGPPNAEAAIARVTDYLEVAIR

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=179, Percent_Identity=35.7541899441341, Blast_Score=91, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20562; Mature: 20431

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTGMMAIRKDALVNATIAEIGRRGSLDVTMGQIAKAAGVSSALAHHYFGSKDDLLLAA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MRAILAEFGTEARAQLARATTPMERLVAITRASFGGQNFRPEVVAAWLTFYVMAQRDDQA
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHH
ARLLRVYQHRLVSNLTHALRPLTNDAPRIAATAAALIDGLYIRHALADLGPPNAEAAIAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VTDYLEVAIR
HHHHHHHHCC
>Mature Secondary Structure 
PRTGMMAIRKDALVNATIAEIGRRGSLDVTMGQIAKAAGVSSALAHHYFGSKDDLLLAA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MRAILAEFGTEARAQLARATTPMERLVAITRASFGGQNFRPEVVAAWLTFYVMAQRDDQA
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHH
ARLLRVYQHRLVSNLTHALRPLTNDAPRIAATAAALIDGLYIRHALADLGPPNAEAAIAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VTDYLEVAIR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA