| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yjhC [C]
Identifier: 89053958
GI number: 89053958
Start: 1436714
End: 1437787
Strand: Direct
Name: yjhC [C]
Synonym: Jann_1467
Alternate gene names: 89053958
Gene position: 1436714-1437787 (Clockwise)
Preceding gene: 89053957
Following gene: 89053959
Centisome position: 33.27
GC content: 61.55
Gene sequence:
>1074_bases ATGACGTACAAGGTCGTCGGCATCAGTTTCGATCATATGCACATGGGCGATCTGCTGCGCATGGTGGACGCTCATCCGAA TGCGGAGATCACGGCACTGTACGACCCGGACCGGGCGAAGATGGCCTCGGCTGCCAAGACCTTCAACATCCCCGACGACG CCCTGTTCACAGATTTTGACGCCTGCATGGCGGCGGGGCCTTATGATCTTGCCATCCTGTGTTGCGCCACGGCGGATCAC GCGGAGATGACCGAGCGTCTTGCCCCCCACGGCGTCCATATCCACGTCGAAAAGCCCTTTGCTGACAGTGCCGACAATGC CCGGAGGATGATCCGCGCGATGAAGGGAACGGGAAAGATCATGTCGATCAACTGGCCGCTGGCGTGGGTGGAATCGCACC TGACGGCCAAGCGCCTGATCGATGAGGGGATGATCGGAGAGTTACGTGAAGTGCATTTCTACGACGGCAATCGCGGCCCG CTCTATCACCTCGCCGACAAGGTTGAGGTCTCACCGGAAGAGGTTGAGGCCCAGAAACCTGATAGCTGGTGGTACAAGTC GGCCTCGGGCGGGGGCAGCCTGTTGGACTACATGGGGTACGGCGCGACGCTTGGCACCTGGTACATGGGCGGTGAGGCCC CGCTAGAAGTCACATGTACCATTGACGAGACGCCCGGGATCGAGGTCGACCAACACGCCATCGCGGTCGTTCGATACGCG CGCGGATTAAGCAAGATGGAGACGCGGTGGGGCACCTTTACCGATCCGTGGAGCGTGAACCCGCAGCCGACTTGCGGATT TGTGTTTGTGGGTCGCGACGGCACGATCAGCAGCCCTGATTACGCGCCTGCCGTCACAGTCCAGACCCGCGCACGGCCGG AAACGCACGAGATCCCCGTTGATCCACTACCTGAGGGTCGCGCGGACGCCATCGCCTATATCATTGATCTGATTGAGAGA AATGCGGCGCCTGAGGGGCCGTTTGATCCGGCCCTGTGCCTGACCGCGCAACGCATTGTGGACACGGCCGCGGCCTCTGC CGCCGCCAAACGCACCCTGGAGATCCTGCCATGA
Upstream 100 bases:
>100_bases CGCTGCTGCAAATGCCCGAGGGCGCACGGATCGCGCTGTTCGGTCTGATCATCCTTCTCGTCACCGCGCTATATGTGCGC ATCACAGGGGCCCGTTAACC
Downstream 100 bases:
>100_bases GCGAGACACGCGACGCCGGTGACAGCGATACTTACGCCTTGAAGGCGGCGGATCTGCCCGAGATTGCCGCGCCCGATGTG GCCTACCGCCCGCCGACGCC
Product: oxidoreductase-like protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dyhydrogenase; Glucose-Fructose Oxidoreductase; NADH-Dependent Dehydrogenase; Oxidoreductase; Glucose-Fructose Oxidoreductase Oxidoreductase Protein; Oxidoreductase-Like
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTYKVVGISFDHMHMGDLLRMVDAHPNAEITALYDPDRAKMASAAKTFNIPDDALFTDFDACMAAGPYDLAILCCATADH AEMTERLAPHGVHIHVEKPFADSADNARRMIRAMKGTGKIMSINWPLAWVESHLTAKRLIDEGMIGELREVHFYDGNRGP LYHLADKVEVSPEEVEAQKPDSWWYKSASGGGSLLDYMGYGATLGTWYMGGEAPLEVTCTIDETPGIEVDQHAIAVVRYA RGLSKMETRWGTFTDPWSVNPQPTCGFVFVGRDGTISSPDYAPAVTVQTRARPETHEIPVDPLPEGRADAIAYIIDLIER NAAPEGPFDPALCLTAQRIVDTAAASAAAKRTLEILP
Sequences:
>Translated_357_residues MTYKVVGISFDHMHMGDLLRMVDAHPNAEITALYDPDRAKMASAAKTFNIPDDALFTDFDACMAAGPYDLAILCCATADH AEMTERLAPHGVHIHVEKPFADSADNARRMIRAMKGTGKIMSINWPLAWVESHLTAKRLIDEGMIGELREVHFYDGNRGP LYHLADKVEVSPEEVEAQKPDSWWYKSASGGGSLLDYMGYGATLGTWYMGGEAPLEVTCTIDETPGIEVDQHAIAVVRYA RGLSKMETRWGTFTDPWSVNPQPTCGFVFVGRDGTISSPDYAPAVTVQTRARPETHEIPVDPLPEGRADAIAYIIDLIER NAAPEGPFDPALCLTAQRIVDTAAASAAAKRTLEILP >Mature_356_residues TYKVVGISFDHMHMGDLLRMVDAHPNAEITALYDPDRAKMASAAKTFNIPDDALFTDFDACMAAGPYDLAILCCATADHA EMTERLAPHGVHIHVEKPFADSADNARRMIRAMKGTGKIMSINWPLAWVESHLTAKRLIDEGMIGELREVHFYDGNRGPL YHLADKVEVSPEEVEAQKPDSWWYKSASGGGSLLDYMGYGATLGTWYMGGEAPLEVTCTIDETPGIEVDQHAIAVVRYAR GLSKMETRWGTFTDPWSVNPQPTCGFVFVGRDGTISSPDYAPAVTVQTRARPETHEIPVDPLPEGRADAIAYIIDLIERN AAPEGPFDPALCLTAQRIVDTAAASAAAKRTLEILP
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082405, Length=153, Percent_Identity=27.4509803921569, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39078; Mature: 38946
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKVVGISFDHMHMGDLLRMVDAHPNAEITALYDPDRAKMASAAKTFNIPDDALFTDFD CEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHH ACMAAGPYDLAILCCATADHAEMTERLAPHGVHIHVEKPFADSADNARRMIRAMKGTGKI HHHHCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCE MSINWPLAWVESHLTAKRLIDEGMIGELREVHFYDGNRGPLYHLADKVEVSPEEVEAQKP EEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHCCCCC DSWWYKSASGGGSLLDYMGYGATLGTWYMGGEAPLEVTCTIDETPGIEVDQHAIAVVRYA CCCEEECCCCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHH RGLSKMETRWGTFTDPWSVNPQPTCGFVFVGRDGTISSPDYAPAVTVQTRARPETHEIPV HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCC DPLPEGRADAIAYIIDLIERNAAPEGPFDPALCLTAQRIVDTAAASAAAKRTLEILP CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure TYKVVGISFDHMHMGDLLRMVDAHPNAEITALYDPDRAKMASAAKTFNIPDDALFTDFD EEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCHHHHHHH ACMAAGPYDLAILCCATADHAEMTERLAPHGVHIHVEKPFADSADNARRMIRAMKGTGKI HHHHCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCE MSINWPLAWVESHLTAKRLIDEGMIGELREVHFYDGNRGPLYHLADKVEVSPEEVEAQKP EEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHCCCCC DSWWYKSASGGGSLLDYMGYGATLGTWYMGGEAPLEVTCTIDETPGIEVDQHAIAVVRYA CCCEEECCCCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHH RGLSKMETRWGTFTDPWSVNPQPTCGFVFVGRDGTISSPDYAPAVTVQTRARPETHEIPV HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCC DPLPEGRADAIAYIIDLIERNAAPEGPFDPALCLTAQRIVDTAAASAAAKRTLEILP CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA