Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053803

Identifier: 89053803

GI number: 89053803

Start: 1274498

End: 1275031

Strand: Reverse

Name: 89053803

Synonym: Jann_1312

Alternate gene names: NA

Gene position: 1275031-1274498 (Counterclockwise)

Preceding gene: 89053805

Following gene: 89053800

Centisome position: 29.53

GC content: 57.3

Gene sequence:

>534_bases
ATGGGCACCATCACGTTCGACAATTTTAACCCAAGGAGATCTACCATGAAACATGTCATCCTGAGCGCCGCAATCGTCGT
CGGACTTGCCGCACAAGGTCACGCAAACGAACAGCTCGCGCAATCAATCGGCGTGGAAGTCGGCGTCTACACCAGCTCAG
AGCTGGTTCAGATGCAAGCCGCCCTCGCCGACAACAACCAAGCCTTGTTCAATCACCTTCAAAGCAGCTTCAACGGACAA
GATGTTGTCACGACAGGTGGCGGCATCTCGGATGGGCACGCTCAGTTTGCCGCCTCCCTTGGCCTTGACCCCGGCACTTA
CACCGCAAGCGAACTCATCCAGATCCGCACCGCACGCGAAAATGGCGATGCTGCAACGGAGCGGTTCCTGACAGGTTCCG
CAGAGGAGATCATCTCGACCCAAAGCGGCGGCATTTCGGCAGGCGCGCGCCAATTGGCGACCACCCTTGGTGTTGATCCG
GCGGATTACACGCTGAGTGAGCTGACACGGATGTATATCTCCGCCTACGACTAA

Upstream 100 bases:

>100_bases
CGTTGCTAAATCTCTAAACATGAAAGGACAGAACGGACGCAGTGGCAACCTGAAACACCCGCTCTCACATGTCCCGGAAG
CCCTCAGGTCGTGTCCAGCA

Downstream 100 bases:

>100_bases
GCGGTTCTGTGGGGCCGTGCGACGATGCGCACCCGGCCAGAAGGTCCGCAGCCAGGTCCCAAGCCCTGGCTGCGGACTTA
CTATTTTCACCCTTTCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MGTITFDNFNPRRSTMKHVILSAAIVVGLAAQGHANEQLAQSIGVEVGVYTSSELVQMQAALADNNQALFNHLQSSFNGQ
DVVTTGGGISDGHAQFAASLGLDPGTYTASELIQIRTARENGDAATERFLTGSAEEIISTQSGGISAGARQLATTLGVDP
ADYTLSELTRMYISAYD

Sequences:

>Translated_177_residues
MGTITFDNFNPRRSTMKHVILSAAIVVGLAAQGHANEQLAQSIGVEVGVYTSSELVQMQAALADNNQALFNHLQSSFNGQ
DVVTTGGGISDGHAQFAASLGLDPGTYTASELIQIRTARENGDAATERFLTGSAEEIISTQSGGISAGARQLATTLGVDP
ADYTLSELTRMYISAYD
>Mature_176_residues
GTITFDNFNPRRSTMKHVILSAAIVVGLAAQGHANEQLAQSIGVEVGVYTSSELVQMQAALADNNQALFNHLQSSFNGQD
VVTTGGGISDGHAQFAASLGLDPGTYTASELIQIRTARENGDAATERFLTGSAEEIISTQSGGISAGARQLATTLGVDPA
DYTLSELTRMYISAYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18558; Mature: 18427

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTITFDNFNPRRSTMKHVILSAAIVVGLAAQGHANEQLAQSIGVEVGVYTSSELVQMQA
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECHHHHHHHHH
ALADNNQALFNHLQSSFNGQDVVTTGGGISDGHAQFAASLGLDPGTYTASELIQIRTARE
HHCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
NGDAATERFLTGSAEEIISTQSGGISAGARQLATTLGVDPADYTLSELTRMYISAYD
CCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTITFDNFNPRRSTMKHVILSAAIVVGLAAQGHANEQLAQSIGVEVGVYTSSELVQMQA
CEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECHHHHHHHHH
ALADNNQALFNHLQSSFNGQDVVTTGGGISDGHAQFAASLGLDPGTYTASELIQIRTARE
HHCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
NGDAATERFLTGSAEEIISTQSGGISAGARQLATTLGVDPADYTLSELTRMYISAYD
CCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA