| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053805
Identifier: 89053805
GI number: 89053805
Start: 1276158
End: 1276796
Strand: Reverse
Name: 89053805
Synonym: Jann_1314
Alternate gene names: NA
Gene position: 1276796-1276158 (Counterclockwise)
Preceding gene: 89053806
Following gene: 89053803
Centisome position: 29.57
GC content: 59.47
Gene sequence:
>639_bases ATGACCGACATATCGTGGGAGATGAACGATCAAACCATCGTCCGCAAGACCGACAAGATCGCGCGGCAAGACACCCTGCC TGATCTGACGTTGAAAAAGGTGAAGCAAGGCGATCGGATGCGGTTTGATGCCCACGTGAATGTGGACAGCATGGCAGAGG GGCAGCACCTGAAAAGGGTGACGATCTTCTCCAACGTGCCCGGCGGCGGAACCTGGGAGCTGATCTCGGACGAAGGCGTG GCAGTTGGCGGGCGCGGTACTGCGCCATCGCCCCAGATGTACTTTGCCGCCGGACTTGGGTTGTGCCTGATGAGCCATGT GGAAATGCTCGCGAAAAGCGGTGAATTTGAGATCACGTCCGCCCGGCTTGAACAGCGCAGTACCTGGACAACGACGATGG ATCTTGGCGCCGTGGCCCCGGCAAATATCTACGGCAAAGGCGAACACATGCAGATGAATCTGATCATCGAAAGCCCAGAG CCTACACCCAAGATCGCAGAGTTCATCGCCTATTGCCGTCAGGCCTGCATGGCGCTGCAAACCGTGGCCGCCGCGACCCC GGTAGCGACAGGCCTCTACCTGAACGGCGCGCATATCGGTGATGTCGGCGGCACCGGGCCATTCGCCAAGGTGGCCTAA
Upstream 100 bases:
>100_bases GGAGCTGGCCGAGACGGTGACGGAAGCGCCCAAACTCATCGCGGCCCAGTGACATCCGACAGGTTTTCGACCCACCAGAC CCAGACCAAGGAGAACTAGA
Downstream 100 bases:
>100_bases GACGGCACGGATCCTGACCGATGCCGGCTACAGGTGGTCGCCTATGATCTGCGGCAACAGTGGGCTGATCTGATGCAATG TCATGCCCGGTGCCAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTDISWEMNDQTIVRKTDKIARQDTLPDLTLKKVKQGDRMRFDAHVNVDSMAEGQHLKRVTIFSNVPGGGTWELISDEGV AVGGRGTAPSPQMYFAAGLGLCLMSHVEMLAKSGEFEITSARLEQRSTWTTTMDLGAVAPANIYGKGEHMQMNLIIESPE PTPKIAEFIAYCRQACMALQTVAAATPVATGLYLNGAHIGDVGGTGPFAKVA
Sequences:
>Translated_212_residues MTDISWEMNDQTIVRKTDKIARQDTLPDLTLKKVKQGDRMRFDAHVNVDSMAEGQHLKRVTIFSNVPGGGTWELISDEGV AVGGRGTAPSPQMYFAAGLGLCLMSHVEMLAKSGEFEITSARLEQRSTWTTTMDLGAVAPANIYGKGEHMQMNLIIESPE PTPKIAEFIAYCRQACMALQTVAAATPVATGLYLNGAHIGDVGGTGPFAKVA >Mature_211_residues TDISWEMNDQTIVRKTDKIARQDTLPDLTLKKVKQGDRMRFDAHVNVDSMAEGQHLKRVTIFSNVPGGGTWELISDEGVA VGGRGTAPSPQMYFAAGLGLCLMSHVEMLAKSGEFEITSARLEQRSTWTTTMDLGAVAPANIYGKGEHMQMNLIIESPEP TPKIAEFIAYCRQACMALQTVAAATPVATGLYLNGAHIGDVGGTGPFAKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22829; Mature: 22698
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDISWEMNDQTIVRKTDKIARQDTLPDLTLKKVKQGDRMRFDAHVNVDSMAEGQHLKRV CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCHHHCCCCCCEEEE TIFSNVPGGGTWELISDEGVAVGGRGTAPSPQMYFAAGLGLCLMSHVEMLAKSGEFEITS EEEECCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEH ARLEQRSTWTTTMDLGAVAPANIYGKGEHMQMNLIIESPEPTPKIAEFIAYCRQACMALQ HHHHHCCCEEEEECCCCCCCCCEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH TVAAATPVATGLYLNGAHIGDVGGTGPFAKVA HHHHHCCHHHCEEECCCEECCCCCCCCCCCCC >Mature Secondary Structure TDISWEMNDQTIVRKTDKIARQDTLPDLTLKKVKQGDRMRFDAHVNVDSMAEGQHLKRV CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCHHHCCCCCCEEEE TIFSNVPGGGTWELISDEGVAVGGRGTAPSPQMYFAAGLGLCLMSHVEMLAKSGEFEITS EEEECCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEH ARLEQRSTWTTTMDLGAVAPANIYGKGEHMQMNLIIESPEPTPKIAEFIAYCRQACMALQ HHHHHCCCEEEEECCCCCCCCCEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH TVAAATPVATGLYLNGAHIGDVGGTGPFAKVA HHHHHCCHHHCEEECCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA