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The map label for this gene is betI [C]

Identifier: 89053800

GI number: 89053800

Start: 1268946

End: 1269614

Strand: Reverse

Name: betI [C]

Synonym: Jann_1309

Alternate gene names: 89053800

Gene position: 1269614-1268946 (Counterclockwise)

Preceding gene: 89053803

Following gene: 89053798

Centisome position: 29.4

GC content: 54.71

Gene sequence:

>669_bases
ATGTTAGAGCTTCTTACTTTGACAAGGGTTACGAAGTCTGAAAGCACTTGGATCATGAAAAAACAAAAAGAAACGTCTGC
TCGCGCCAGCTATCACCATGGCGATCTTCGCGCGCAATTGATCGAAGCCACGCGCCACTTGGTTGAAGAAAAAGGGCCCG
ATCACTTGTCAGTGTCAGAGGCCTGCCGTCGCGCAGGTGTGTCGACGGCGGCGCCCTACAAGCATTTCAGGGACAAAGAT
GATCTGCTCCGCGCCGTGGCATTCGAGGGGATGGAGCGTCAGCACGCTCAAATGCTTGAAGCGATCGAGCCCCTGCCCGA
ACGCGACCTTGCCAGGTTCTCTGCATTGGGTCGTGTCTACATTGGGTTCGCCCAGACCGAACCTGCGGTGTTCCGCCTGA
TGTTTGGCCTATCAGAGGATCATGCAGATGATGAAGCACTGGTAGCGAAAGGGCGCAGCACCTTTGGGATTGTGCAAACG
GAAGCCGCGGCCTTCCGGGGCAGCGACACCGTCGAAGACATCGATCTACGCCGCGCTTTTCAACTGTGGAGCTTCGTGCA
CGGACTGGCATTTTTGTTGATCGACGGAAAACTGCAGCAAATGGATTTGCCTTTGGATCTGGAGGATATGCTCGATGATA
TTGGGCGGAAGGTGATGCTGGAGGAATGA

Upstream 100 bases:

>100_bases
AACGCTGATTGTTACGAGCTGACGTAACGCGCGCCGCCACCAGACACTACTCGTTTGATTGACCATAGCCTTGACCTTTC
GATGTTAGAGGTCCTAACAT

Downstream 100 bases:

>100_bases
GTATTTGCGCGAGAAATTTCGGCCCAAAGCCGCCGTTGGCCATCTGCTTTGGAGGCTGCGGACGCAGCCCACATTGCGGA
CGTTCGCTGCGTTCGCAATG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator TetR; Transcription Regulator TetR Family Protein; Transcriptional Regulator TetR-Family; TetR-Family Protein Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLELLTLTRVTKSESTWIMKKQKETSARASYHHGDLRAQLIEATRHLVEEKGPDHLSVSEACRRAGVSTAAPYKHFRDKD
DLLRAVAFEGMERQHAQMLEAIEPLPERDLARFSALGRVYIGFAQTEPAVFRLMFGLSEDHADDEALVAKGRSTFGIVQT
EAAAFRGSDTVEDIDLRRAFQLWSFVHGLAFLLIDGKLQQMDLPLDLEDMLDDIGRKVMLEE

Sequences:

>Translated_222_residues
MLELLTLTRVTKSESTWIMKKQKETSARASYHHGDLRAQLIEATRHLVEEKGPDHLSVSEACRRAGVSTAAPYKHFRDKD
DLLRAVAFEGMERQHAQMLEAIEPLPERDLARFSALGRVYIGFAQTEPAVFRLMFGLSEDHADDEALVAKGRSTFGIVQT
EAAAFRGSDTVEDIDLRRAFQLWSFVHGLAFLLIDGKLQQMDLPLDLEDMLDDIGRKVMLEE
>Mature_222_residues
MLELLTLTRVTKSESTWIMKKQKETSARASYHHGDLRAQLIEATRHLVEEKGPDHLSVSEACRRAGVSTAAPYKHFRDKD
DLLRAVAFEGMERQHAQMLEAIEPLPERDLARFSALGRVYIGFAQTEPAVFRLMFGLSEDHADDEALVAKGRSTFGIVQT
EAAAFRGSDTVEDIDLRRAFQLWSFVHGLAFLLIDGKLQQMDLPLDLEDMLDDIGRKVMLEE

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25100; Mature: 25100

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLTLTRVTKSESTWIMKKQKETSARASYHHGDLRAQLIEATRHLVEEKGPDHLSVSE
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
ACRRAGVSTAAPYKHFRDKDDLLRAVAFEGMERQHAQMLEAIEPLPERDLARFSALGRVY
HHHHCCCCCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE
IGFAQTEPAVFRLMFGLSEDHADDEALVAKGRSTFGIVQTEAAAFRGSDTVEDIDLRRAF
EEECCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHH
QLWSFVHGLAFLLIDGKLQQMDLPLDLEDMLDDIGRKVMLEE
HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCHHHCCCC
>Mature Secondary Structure
MLELLTLTRVTKSESTWIMKKQKETSARASYHHGDLRAQLIEATRHLVEEKGPDHLSVSE
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
ACRRAGVSTAAPYKHFRDKDDLLRAVAFEGMERQHAQMLEAIEPLPERDLARFSALGRVY
HHHHCCCCCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE
IGFAQTEPAVFRLMFGLSEDHADDEALVAKGRSTFGIVQTEAAAFRGSDTVEDIDLRRAF
EEECCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHH
QLWSFVHGLAFLLIDGKLQQMDLPLDLEDMLDDIGRKVMLEE
HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA