| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053753
Identifier: 89053753
GI number: 89053753
Start: 1222291
End: 1223247
Strand: Direct
Name: 89053753
Synonym: Jann_1262
Alternate gene names: NA
Gene position: 1222291-1223247 (Clockwise)
Preceding gene: 89053752
Following gene: 89053754
Centisome position: 28.31
GC content: 59.98
Gene sequence:
>957_bases ATGGGCGCGGCGGAGTATGCATCTCAGGTCAGGACCCTGCCCAAACTGGGCCTGGGCGTGGGTCTGCGCAACGAACACTT CAACCATATTCTGTCAGAGCGTCCGAATGTGGATTGGTTCGAGGCGATTTCCGAGAATTTCATGGATTCCGGTGGCCGAC CCGGCTGGGTGATCCGCCAGATCGCAGAGCATTACCCAATCGTTCTGCATGGCGTTTCCCTGTCAATCGGCAGTGCCGAT CCGCTGAACGAGGGCTATCTGGCCAGGCTGAAGCTGCTGGCGGATGATGTGCAGGCCAAGTGGGTCAGTGATCATTTGTG CTGGACGGGTGTGCTGAGCATCAACAGCCACGATCTGCTGCCGCTGCCTTTGAATGAAGAAACGCTCGGCCACGTGACAT CCCGTGTCCACCATGTCCAGGAGGTGCTGGGGCGGCCCCTGATCCTGGAGAACCCGTCCACTTACGCCAGCTTCCAGACC TCGGACATTCCAGAGCCCGAATTTCTGCGCGCGCTCTCGGATGCCACGGGCTGCGGGCTGCTTCTGGATGTGAATAACGT CTACGTATCGTGCTTTAACGATGGCACAGATCCACTTGAATATCTTGAAAAAATTCCGTTTGAAAAAGTTATCCAGATGC ATCTGGCTGGCCACACAAACTGTGGAGAATTCCTGCTCGACACCCATGATCAACCGGTCACGCGCGGGGTGTGGGAGCTG TTCCGTCTGGCGTGGCAGCGCACGGGCGGTGCCGCGACCCTGCTGGAATGGGACGGCGATGTGCCCGCCTTCGAGGATCT CCACGCGGAGGTTTTGAAGGCGAGGGAGTTCATGGCCGGAGAGGTCGAGGCGCTGCACCTGTACCAGGGCGCAGCCGCAC CGGGCCGGGCCCGCGTCTCAAATCCGGTGGATCACATCGTCTCACCGGTGCGGGGCCATTCCCGGCTGGACGCATGA
Upstream 100 bases:
>100_bases TCAAAGATGGCCCGACCATCGAGTGGATCGCGGATGCCAGTGGCGAGGGGATGACAGCCTGCGGGGCCAGCGGCATGAGC GGCGCGGGCAGCTGCGCCTG
Downstream 100 bases:
>100_bases GCAACGACACGTCACTGCGCGCGATGCAGGCGTGGATGCAGGCGGCACTGATCAACCCGCGCGGCGTGCGGGGGGAGGAG GTGGCCGCCCGACTTGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MGAAEYASQVRTLPKLGLGVGLRNEHFNHILSERPNVDWFEAISENFMDSGGRPGWVIRQIAEHYPIVLHGVSLSIGSAD PLNEGYLARLKLLADDVQAKWVSDHLCWTGVLSINSHDLLPLPLNEETLGHVTSRVHHVQEVLGRPLILENPSTYASFQT SDIPEPEFLRALSDATGCGLLLDVNNVYVSCFNDGTDPLEYLEKIPFEKVIQMHLAGHTNCGEFLLDTHDQPVTRGVWEL FRLAWQRTGGAATLLEWDGDVPAFEDLHAEVLKAREFMAGEVEALHLYQGAAAPGRARVSNPVDHIVSPVRGHSRLDA
Sequences:
>Translated_318_residues MGAAEYASQVRTLPKLGLGVGLRNEHFNHILSERPNVDWFEAISENFMDSGGRPGWVIRQIAEHYPIVLHGVSLSIGSAD PLNEGYLARLKLLADDVQAKWVSDHLCWTGVLSINSHDLLPLPLNEETLGHVTSRVHHVQEVLGRPLILENPSTYASFQT SDIPEPEFLRALSDATGCGLLLDVNNVYVSCFNDGTDPLEYLEKIPFEKVIQMHLAGHTNCGEFLLDTHDQPVTRGVWEL FRLAWQRTGGAATLLEWDGDVPAFEDLHAEVLKAREFMAGEVEALHLYQGAAAPGRARVSNPVDHIVSPVRGHSRLDA >Mature_317_residues GAAEYASQVRTLPKLGLGVGLRNEHFNHILSERPNVDWFEAISENFMDSGGRPGWVIRQIAEHYPIVLHGVSLSIGSADP LNEGYLARLKLLADDVQAKWVSDHLCWTGVLSINSHDLLPLPLNEETLGHVTSRVHHVQEVLGRPLILENPSTYASFQTS DIPEPEFLRALSDATGCGLLLDVNNVYVSCFNDGTDPLEYLEKIPFEKVIQMHLAGHTNCGEFLLDTHDQPVTRGVWELF RLAWQRTGGAATLLEWDGDVPAFEDLHAEVLKAREFMAGEVEALHLYQGAAAPGRARVSNPVDHIVSPVRGHSRLDA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 35184; Mature: 35053
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAAEYASQVRTLPKLGLGVGLRNEHFNHILSERPNVDWFEAISENFMDSGGRPGWVIRQ CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHH IAEHYPIVLHGVSLSIGSADPLNEGYLARLKLLADDVQAKWVSDHLCWTGVLSINSHDLL HHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEE PLPLNEETLGHVTSRVHHVQEVLGRPLILENPSTYASFQTSDIPEPEFLRALSDATGCGL ECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEE LLDVNNVYVSCFNDGTDPLEYLEKIPFEKVIQMHLAGHTNCGEFLLDTHDQPVTRGVWEL EEEECCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH FRLAWQRTGGAATLLEWDGDVPAFEDLHAEVLKAREFMAGEVEALHLYQGAAAPGRARVS HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCC NPVDHIVSPVRGHSRLDA CCHHHHHCCCCCCCCCCC >Mature Secondary Structure GAAEYASQVRTLPKLGLGVGLRNEHFNHILSERPNVDWFEAISENFMDSGGRPGWVIRQ CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHH IAEHYPIVLHGVSLSIGSADPLNEGYLARLKLLADDVQAKWVSDHLCWTGVLSINSHDLL HHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEE PLPLNEETLGHVTSRVHHVQEVLGRPLILENPSTYASFQTSDIPEPEFLRALSDATGCGL ECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEE LLDVNNVYVSCFNDGTDPLEYLEKIPFEKVIQMHLAGHTNCGEFLLDTHDQPVTRGVWEL EEEECCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH FRLAWQRTGGAATLLEWDGDVPAFEDLHAEVLKAREFMAGEVEALHLYQGAAAPGRARVS HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCC NPVDHIVSPVRGHSRLDA CCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA