| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053754
Identifier: 89053754
GI number: 89053754
Start: 1223244
End: 1224044
Strand: Direct
Name: 89053754
Synonym: Jann_1263
Alternate gene names: NA
Gene position: 1223244-1224044 (Clockwise)
Preceding gene: 89053753
Following gene: 89053756
Centisome position: 28.33
GC content: 62.92
Gene sequence:
>801_bases ATGAGCAACGACACGTCACTGCGCGCGATGCAGGCGTGGATGCAGGCGGCACTGATCAACCCGCGCGGCGTGCGGGGGGA GGAGGTGGCCGCCCGACTTGTCCCCTCCAATCGCCTGTCGGCGGCAGAGCGTCTCGGGATCTATCAGCGCAGCTATATCG CACGGCTCTGCGCCTGTCTGGCGGAACAATTCCCGGCTTCGCGCCATGCGTTGGGCGACGATCTTTTCGACCAGTTCGCG CGGGTCTATTTGGCCGAAGATCCGTCGGACAGCTACACGCTGCACGAGCTTGGACGCCGGTTTCCCGCGTTTCTGGACGC CTCCCGTCCCGATGCGGACGATCCGGAGCCATGGGTGACGTTCATGATAGATCTCGCGCGGTATGAACGCACATTGTTCG TCCTATTTGACGCGCCGGGCCATGAGGGCAAGCCGTGGCCCACACCCGCAACACCCGATGAAAACCTGATCCTGCAGCCT TGTTTCGCGCTGGGAGCCTACCAGTTCCCGGTCGCGCATTACTACCACAGCGTCGCCGATCACGCCGAGCCGGGCCTGCC GCCCCAAACCGACAGCTTCGTGGCGATCACCCGGTGCGATTATCTGACCTCGTCATTTCCGATATCCCGCCAGCATCATC TGATCCTGACGACAATGCAGGAGACACAAAGTATAGACGCCGTGCTGACGCTGGTGGCGCAGCGGGCGGGCCTGCCGGAG GCTGAGCTGCGATCCGCCTGGCGCGGTCAGATCCGGGATCGCTGGATTGCCAACCACGTCTTTATTGATCGTCTGACCTG A
Upstream 100 bases:
>100_bases TGCACCTGTACCAGGGCGCAGCCGCACCGGGCCGGGCCCGCGTCTCAAATCCGGTGGATCACATCGTCTCACCGGTGCGG GGCCATTCCCGGCTGGACGC
Downstream 100 bases:
>100_bases AACTATTCCGCCGCGATCTGCATCGGCACTGGCGCGGCATAGCCATCGCGGGTTTGCGGCACCTTGATCCCAAGGGCGGA CCCGGCGATCTGCGTCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSNDTSLRAMQAWMQAALINPRGVRGEEVAARLVPSNRLSAAERLGIYQRSYIARLCACLAEQFPASRHALGDDLFDQFA RVYLAEDPSDSYTLHELGRRFPAFLDASRPDADDPEPWVTFMIDLARYERTLFVLFDAPGHEGKPWPTPATPDENLILQP CFALGAYQFPVAHYYHSVADHAEPGLPPQTDSFVAITRCDYLTSSFPISRQHHLILTTMQETQSIDAVLTLVAQRAGLPE AELRSAWRGQIRDRWIANHVFIDRLT
Sequences:
>Translated_266_residues MSNDTSLRAMQAWMQAALINPRGVRGEEVAARLVPSNRLSAAERLGIYQRSYIARLCACLAEQFPASRHALGDDLFDQFA RVYLAEDPSDSYTLHELGRRFPAFLDASRPDADDPEPWVTFMIDLARYERTLFVLFDAPGHEGKPWPTPATPDENLILQP CFALGAYQFPVAHYYHSVADHAEPGLPPQTDSFVAITRCDYLTSSFPISRQHHLILTTMQETQSIDAVLTLVAQRAGLPE AELRSAWRGQIRDRWIANHVFIDRLT >Mature_265_residues SNDTSLRAMQAWMQAALINPRGVRGEEVAARLVPSNRLSAAERLGIYQRSYIARLCACLAEQFPASRHALGDDLFDQFAR VYLAEDPSDSYTLHELGRRFPAFLDASRPDADDPEPWVTFMIDLARYERTLFVLFDAPGHEGKPWPTPATPDENLILQPC FALGAYQFPVAHYYHSVADHAEPGLPPQTDSFVAITRCDYLTSSFPISRQHHLILTTMQETQSIDAVLTLVAQRAGLPEA ELRSAWRGQIRDRWIANHVFIDRLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30025; Mature: 29894
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDTSLRAMQAWMQAALINPRGVRGEEVAARLVPSNRLSAAERLGIYQRSYIARLCACL CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AEQFPASRHALGDDLFDQFARVYLAEDPSDSYTLHELGRRFPAFLDASRPDADDPEPWVT HHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH FMIDLARYERTLFVLFDAPGHEGKPWPTPATPDENLILQPCFALGAYQFPVAHYYHSVAD HHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHH HAEPGLPPQTDSFVAITRCDYLTSSFPISRQHHLILTTMQETQSIDAVLTLVAQRAGLPE HCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCH AELRSAWRGQIRDRWIANHVFIDRLT HHHHHHHHHHHHHHHHHHHEEEECCC >Mature Secondary Structure SNDTSLRAMQAWMQAALINPRGVRGEEVAARLVPSNRLSAAERLGIYQRSYIARLCACL CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AEQFPASRHALGDDLFDQFARVYLAEDPSDSYTLHELGRRFPAFLDASRPDADDPEPWVT HHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH FMIDLARYERTLFVLFDAPGHEGKPWPTPATPDENLILQPCFALGAYQFPVAHYYHSVAD HHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHH HAEPGLPPQTDSFVAITRCDYLTSSFPISRQHHLILTTMQETQSIDAVLTLVAQRAGLPE HCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCH AELRSAWRGQIRDRWIANHVFIDRLT HHHHHHHHHHHHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA