Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89053752

Identifier: 89053752

GI number: 89053752

Start: 1220000

End: 1222291

Strand: Direct

Name: 89053752

Synonym: Jann_1261

Alternate gene names: NA

Gene position: 1220000-1222291 (Clockwise)

Preceding gene: 89053751

Following gene: 89053753

Centisome position: 28.25

GC content: 62.3

Gene sequence:

>2292_bases
ATGACCACCCCTGAGCCTTCCTCCGTCCCGCCAGAGACCCTCGCCGCGATCAAGGCCATGACGCAAGACGCCGCCGTGGC
GGAGCTGAAGACGGTCCTTCGCGCGGCCGTCAAGCTGGAGATGGCGACGATCCCGATCTACCTCTACACCTATTATTCAG
TCTGCCGGAAACCCGGGCGCAAGGACCCGCCAACGCGCGCGGGTCATCCGGTGCCCGAGAACTCCGCCTTCCCCGATCCG
TCCTCCCTTTATGGCAATGCGGCCGCGGGCGTGATCATGAGCGTTGCCGTGGAAGAAATGCTGCACATGTCACTGGCGAT
GAACCTTCTGTCGTCCACGCTGGAGGAGGATGAAGATCTGCCGCAGATCTACGATGGGCTGACATTTGGCAACGGTGGCG
GCATCGTGTTGCCAGTGCTGAGTACCCTTGCGCCTGATCCCGGGCGCGGCCCCGGCGGGCACCCGGTGGAAGTTGTCACG
GGCAACGCGCTGGAAATCCCGCTCGCCAAACTCAGCCTTGATCAGTTGCAGCATTTCATGCGCATCGAATATCCCGGCAA
GAAGGATTCCACATCTGGTGTGATCAATCCGACGGCACCGGATTGGGCAACCATCGGCGAGGTCTACGACTACGCCAAGG
CCCTGATCCAAAGCTGCGCTGGCGGCGCAGGGATGGAGGATGCGGTGTTCCAGAAGAACACCACGACGCAGATCGGGTCA
GACAATTACTCGGCCAGCAGCATCGACACGCTGTCGTCGGGCTCCAAGCCGTTTACCTTTGTTGATCCACCCGTGGTCGG
CACCTCCAACCCGCCCGATCATATCGCGGCCTCCACCGTGGCGCAGTTCGAGAATGATGATGCCCATGACCATGAAGGGG
ACGACGCGCTGTTTCGGATCACCAGCGCGGCAGGGGCCGTGACGGCAATCAACACGATCTGCGAACAGGGGGAGGGGGCT
GATTTCACCGGATACGTCGAAGACGACGATATTGAGCAGTCCCATTACTACAAATTTTGGTCCCTGTGCGCACAGCTTGA
TGGCTATCCCGCCCGGATGCAGACACCGCCCCAGGTTGCGGGCATGGACGCGCCGCCGCCCGTGACACCCCAGATCGCCG
ATTTGGGAGAGCGGTTCGTCTACAATGTCCCGACCAATCCGAAAGCGTCGGACTATTCCGATGCGGCACGGGCGACCGTG
GACGTGGCCAACGGCCTGTTTCAATACATGCTGATCCTGTCCGAGACGACGTTGCTGGTGCCCGAGGCGCACCAGAAGCT
CTACTTCAACAAGACCATGCATCAGTCGATGATCTGGGTGATGGACAAGTTCTACCAAGGCCTGCGCCATGCCCAAGACC
GCGGTGTGCAACTGGTGCCAACGTTCGAAAACCCCTTCCCCGCAGGGACCACGCGAGAGACGGCGTTTGCAGCGCTGCAA
GAGCTGGTACGGGTGTGTGAGGCGAAATCTGCCTGTCTGGAAGGCTACGCGGCTTTTGGCTGGACATTGGCCGAGGTGTC
AGCCCTGCCGGACGTCTCGCCGTTCTGGACCGGCAATGTGGGCGAAACGCCGAGGCAATTGCCCGCCTTCCTGGATGTGC
CCGACATCGCCGCCGTCTCGCCGGAGGAGGAGAAGGCCGGACATGCCGCGCATGAGACGATCATCGGCCCCGATCACCCC
CGCTACACTGGTACCCAGAAGTTCCCCGCAAGCCCGCCCGAAGATCTGCAACTCGACCTTGCCGCAGGCGTCGGCAATTG
GGTGCGCCATGCCTGTATGGGCCTGAATTCCTGCAAGAATCAGGGGCGCACGCTTCGTAATGATTGTGCCGGACAAGGGT
GGTGTGCCACCTCGCTGGGCTACAACGCCGCCGACGTGTCGCAGCCGTTGATCTCGGACCACACTTGTCACGTCAAAAAC
GATTGTCGCGGGCAAGGGGGCTGCGGGCTATATGGCACGCAGGACGAGTTGAACATGCCGGGCGGCAATACCTGCCAAAC
GCAAGGCTCCTGCGCCACGCCAATCAACGCGGAGCGCTTCATCACCGAAGGCGAGAACCGGCGCAAAAGCGTTTGGAAAC
AGGCGCGTGCGCATTTCAAGGCGGAGGTTTGGCCCGTCCTTGCCGCATCCGGTGGGGGGACGGTACCGCCGCCCGCCGAT
GGCCAGAACTTCCCCGACAACACCGCGCATTTCAAAGATGGCCCGACCATCGAGTGGATCGCGGATGCCAGTGGCGAGGG
GATGACAGCCTGCGGGGCCAGCGGCATGAGCGGCGCGGGCAGCTGCGCCTGA

Upstream 100 bases:

>100_bases
CGGGAAAGGACCAATGATCCAACGCCCCTAAGGTGAAAATCTCTGGCCAACGCTGCGGTGCCTCGGCAACCCTTGCGGCG
TGTATGGCAGGAGATTTTTG

Downstream 100 bases:

>100_bases
TGGGCGCGGCGGAGTATGCATCTCAGGTCAGGACCCTGCCCAAACTGGGCCTGGGCGTGGGTCTGCGCAACGAACACTTC
AACCATATTCTGTCAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 763; Mature: 762

Protein sequence:

>763_residues
MTTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGRKDPPTRAGHPVPENSAFPDP
SSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDLPQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVT
GNALEIPLAKLSLDQLQHFMRIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS
DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRITSAAGAVTAINTICEQGEGA
DFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVAGMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATV
DVANGLFQYMLILSETTLLVPEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ
ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVSPEEEKAGHAAHETIIGPDHP
RYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKNQGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKN
DCRGQGGCGLYGTQDELNMPGGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD
GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA

Sequences:

>Translated_763_residues
MTTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGRKDPPTRAGHPVPENSAFPDP
SSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDLPQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVT
GNALEIPLAKLSLDQLQHFMRIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS
DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRITSAAGAVTAINTICEQGEGA
DFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVAGMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATV
DVANGLFQYMLILSETTLLVPEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ
ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVSPEEEKAGHAAHETIIGPDHP
RYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKNQGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKN
DCRGQGGCGLYGTQDELNMPGGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD
GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA
>Mature_762_residues
TTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGRKDPPTRAGHPVPENSAFPDPS
SLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDLPQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVTG
NALEIPLAKLSLDQLQHFMRIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGSD
NYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRITSAAGAVTAINTICEQGEGAD
FTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVAGMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATVD
VANGLFQYMLILSETTLLVPEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQE
LVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVSPEEEKAGHAAHETIIGPDHPR
YTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKNQGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKND
CRGQGGCGLYGTQDELNMPGGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPADG
QNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81327; Mature: 81196

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KDPPTRAGHPVPENSAFPDPSSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDL
CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVTGNALEIPLAKLSLDQLQHFM
HHHHCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHH
RIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC
DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRI
CCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
TSAAGAVTAINTICEQGEGADFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVA
HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATVDVANGLFQYMLILSETTLLV
CCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEC
PEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHH
ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
PEEEKAGHAAHETIIGPDHPRYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKN
CCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHH
QGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKNDCRGQGGCGLYGTQDELNMP
CCCCHHHHCCCCCEEECCCCCCHHHHCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC
GGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD
CCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC
GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA
CCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
TTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KDPPTRAGHPVPENSAFPDPSSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDL
CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVTGNALEIPLAKLSLDQLQHFM
HHHHCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHH
RIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC
DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRI
CCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
TSAAGAVTAINTICEQGEGADFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVA
HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATVDVANGLFQYMLILSETTLLV
CCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEC
PEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHH
ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
PEEEKAGHAAHETIIGPDHPRYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKN
CCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHH
QGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKNDCRGQGGCGLYGTQDELNMP
CCCCHHHHCCCCCEEECCCCCCHHHHCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC
GGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD
CCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC
GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA
CCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA