| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053752
Identifier: 89053752
GI number: 89053752
Start: 1220000
End: 1222291
Strand: Direct
Name: 89053752
Synonym: Jann_1261
Alternate gene names: NA
Gene position: 1220000-1222291 (Clockwise)
Preceding gene: 89053751
Following gene: 89053753
Centisome position: 28.25
GC content: 62.3
Gene sequence:
>2292_bases ATGACCACCCCTGAGCCTTCCTCCGTCCCGCCAGAGACCCTCGCCGCGATCAAGGCCATGACGCAAGACGCCGCCGTGGC GGAGCTGAAGACGGTCCTTCGCGCGGCCGTCAAGCTGGAGATGGCGACGATCCCGATCTACCTCTACACCTATTATTCAG TCTGCCGGAAACCCGGGCGCAAGGACCCGCCAACGCGCGCGGGTCATCCGGTGCCCGAGAACTCCGCCTTCCCCGATCCG TCCTCCCTTTATGGCAATGCGGCCGCGGGCGTGATCATGAGCGTTGCCGTGGAAGAAATGCTGCACATGTCACTGGCGAT GAACCTTCTGTCGTCCACGCTGGAGGAGGATGAAGATCTGCCGCAGATCTACGATGGGCTGACATTTGGCAACGGTGGCG GCATCGTGTTGCCAGTGCTGAGTACCCTTGCGCCTGATCCCGGGCGCGGCCCCGGCGGGCACCCGGTGGAAGTTGTCACG GGCAACGCGCTGGAAATCCCGCTCGCCAAACTCAGCCTTGATCAGTTGCAGCATTTCATGCGCATCGAATATCCCGGCAA GAAGGATTCCACATCTGGTGTGATCAATCCGACGGCACCGGATTGGGCAACCATCGGCGAGGTCTACGACTACGCCAAGG CCCTGATCCAAAGCTGCGCTGGCGGCGCAGGGATGGAGGATGCGGTGTTCCAGAAGAACACCACGACGCAGATCGGGTCA GACAATTACTCGGCCAGCAGCATCGACACGCTGTCGTCGGGCTCCAAGCCGTTTACCTTTGTTGATCCACCCGTGGTCGG CACCTCCAACCCGCCCGATCATATCGCGGCCTCCACCGTGGCGCAGTTCGAGAATGATGATGCCCATGACCATGAAGGGG ACGACGCGCTGTTTCGGATCACCAGCGCGGCAGGGGCCGTGACGGCAATCAACACGATCTGCGAACAGGGGGAGGGGGCT GATTTCACCGGATACGTCGAAGACGACGATATTGAGCAGTCCCATTACTACAAATTTTGGTCCCTGTGCGCACAGCTTGA TGGCTATCCCGCCCGGATGCAGACACCGCCCCAGGTTGCGGGCATGGACGCGCCGCCGCCCGTGACACCCCAGATCGCCG ATTTGGGAGAGCGGTTCGTCTACAATGTCCCGACCAATCCGAAAGCGTCGGACTATTCCGATGCGGCACGGGCGACCGTG GACGTGGCCAACGGCCTGTTTCAATACATGCTGATCCTGTCCGAGACGACGTTGCTGGTGCCCGAGGCGCACCAGAAGCT CTACTTCAACAAGACCATGCATCAGTCGATGATCTGGGTGATGGACAAGTTCTACCAAGGCCTGCGCCATGCCCAAGACC GCGGTGTGCAACTGGTGCCAACGTTCGAAAACCCCTTCCCCGCAGGGACCACGCGAGAGACGGCGTTTGCAGCGCTGCAA GAGCTGGTACGGGTGTGTGAGGCGAAATCTGCCTGTCTGGAAGGCTACGCGGCTTTTGGCTGGACATTGGCCGAGGTGTC AGCCCTGCCGGACGTCTCGCCGTTCTGGACCGGCAATGTGGGCGAAACGCCGAGGCAATTGCCCGCCTTCCTGGATGTGC CCGACATCGCCGCCGTCTCGCCGGAGGAGGAGAAGGCCGGACATGCCGCGCATGAGACGATCATCGGCCCCGATCACCCC CGCTACACTGGTACCCAGAAGTTCCCCGCAAGCCCGCCCGAAGATCTGCAACTCGACCTTGCCGCAGGCGTCGGCAATTG GGTGCGCCATGCCTGTATGGGCCTGAATTCCTGCAAGAATCAGGGGCGCACGCTTCGTAATGATTGTGCCGGACAAGGGT GGTGTGCCACCTCGCTGGGCTACAACGCCGCCGACGTGTCGCAGCCGTTGATCTCGGACCACACTTGTCACGTCAAAAAC GATTGTCGCGGGCAAGGGGGCTGCGGGCTATATGGCACGCAGGACGAGTTGAACATGCCGGGCGGCAATACCTGCCAAAC GCAAGGCTCCTGCGCCACGCCAATCAACGCGGAGCGCTTCATCACCGAAGGCGAGAACCGGCGCAAAAGCGTTTGGAAAC AGGCGCGTGCGCATTTCAAGGCGGAGGTTTGGCCCGTCCTTGCCGCATCCGGTGGGGGGACGGTACCGCCGCCCGCCGAT GGCCAGAACTTCCCCGACAACACCGCGCATTTCAAAGATGGCCCGACCATCGAGTGGATCGCGGATGCCAGTGGCGAGGG GATGACAGCCTGCGGGGCCAGCGGCATGAGCGGCGCGGGCAGCTGCGCCTGA
Upstream 100 bases:
>100_bases CGGGAAAGGACCAATGATCCAACGCCCCTAAGGTGAAAATCTCTGGCCAACGCTGCGGTGCCTCGGCAACCCTTGCGGCG TGTATGGCAGGAGATTTTTG
Downstream 100 bases:
>100_bases TGGGCGCGGCGGAGTATGCATCTCAGGTCAGGACCCTGCCCAAACTGGGCCTGGGCGTGGGTCTGCGCAACGAACACTTC AACCATATTCTGTCAGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MTTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGRKDPPTRAGHPVPENSAFPDP SSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDLPQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVT GNALEIPLAKLSLDQLQHFMRIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRITSAAGAVTAINTICEQGEGA DFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVAGMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATV DVANGLFQYMLILSETTLLVPEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVSPEEEKAGHAAHETIIGPDHP RYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKNQGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKN DCRGQGGCGLYGTQDELNMPGGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA
Sequences:
>Translated_763_residues MTTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGRKDPPTRAGHPVPENSAFPDP SSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDLPQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVT GNALEIPLAKLSLDQLQHFMRIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRITSAAGAVTAINTICEQGEGA DFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVAGMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATV DVANGLFQYMLILSETTLLVPEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVSPEEEKAGHAAHETIIGPDHP RYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKNQGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKN DCRGQGGCGLYGTQDELNMPGGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA >Mature_762_residues TTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGRKDPPTRAGHPVPENSAFPDPS SLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDLPQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVTG NALEIPLAKLSLDQLQHFMRIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGSD NYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRITSAAGAVTAINTICEQGEGAD FTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVAGMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATVD VANGLFQYMLILSETTLLVPEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQE LVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVSPEEEKAGHAAHETIIGPDHPR YTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKNQGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKND CRGQGGCGLYGTQDELNMPGGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPADG QNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81327; Mature: 81196
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KDPPTRAGHPVPENSAFPDPSSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDL CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH PQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVTGNALEIPLAKLSLDQLQHFM HHHHCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHH RIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRI CCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE TSAAGAVTAINTICEQGEGADFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVA HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC GMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATVDVANGLFQYMLILSETTLLV CCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEC PEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHH ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC PEEEKAGHAAHETIIGPDHPRYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKN CCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHH QGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKNDCRGQGGCGLYGTQDELNMP CCCCHHHHCCCCCEEECCCCCCHHHHCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC GGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD CCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA CCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure TTPEPSSVPPETLAAIKAMTQDAAVAELKTVLRAAVKLEMATIPIYLYTYYSVCRKPGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KDPPTRAGHPVPENSAFPDPSSLYGNAAAGVIMSVAVEEMLHMSLAMNLLSSTLEEDEDL CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH PQIYDGLTFGNGGGIVLPVLSTLAPDPGRGPGGHPVEVVTGNALEIPLAKLSLDQLQHFM HHHHCCCEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHH RIEYPGKKDSTSGVINPTAPDWATIGEVYDYAKALIQSCAGGAGMEDAVFQKNTTTQIGS EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC DNYSASSIDTLSSGSKPFTFVDPPVVGTSNPPDHIAASTVAQFENDDAHDHEGDDALFRI CCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE TSAAGAVTAINTICEQGEGADFTGYVEDDDIEQSHYYKFWSLCAQLDGYPARMQTPPQVA HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC GMDAPPPVTPQIADLGERFVYNVPTNPKASDYSDAARATVDVANGLFQYMLILSETTLLV CCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEC PEAHQKLYFNKTMHQSMIWVMDKFYQGLRHAQDRGVQLVPTFENPFPAGTTRETAFAALQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHH ELVRVCEAKSACLEGYAAFGWTLAEVSALPDVSPFWTGNVGETPRQLPAFLDVPDIAAVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC PEEEKAGHAAHETIIGPDHPRYTGTQKFPASPPEDLQLDLAAGVGNWVRHACMGLNSCKN CCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHH QGRTLRNDCAGQGWCATSLGYNAADVSQPLISDHTCHVKNDCRGQGGCGLYGTQDELNMP CCCCHHHHCCCCCEEECCCCCCHHHHCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC GGNTCQTQGSCATPINAERFITEGENRRKSVWKQARAHFKAEVWPVLAASGGGTVPPPAD CCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC GQNFPDNTAHFKDGPTIEWIADASGEGMTACGASGMSGAGSCA CCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA