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The map label for this gene is omp16 [H]

Identifier: 89053487

GI number: 89053487

Start: 954941

End: 955594

Strand: Reverse

Name: omp16 [H]

Synonym: Jann_0996

Alternate gene names: 89053487

Gene position: 955594-954941 (Counterclockwise)

Preceding gene: 89053488

Following gene: 89053486

Centisome position: 22.13

GC content: 63.46

Gene sequence:

>654_bases
ATGACTAAAGCACTCCATTCCCGCCGCTCCGTTCTGGCCAGCCTGGGCTCTACCCTCGCGCTGACCGCCTGCGGATCCAC
CTTCGTCGAAACCGGCCGCCCCCTGGGTGCGCATCTGGACGAAGGTCAGTTCGGCGGACCCACACGCAGCAATATCGGCG
TGCACAATGGCGATATCCAATGGGCCGAAATCCTGGGTGAGCGTTTCGCAAATTCGGTGCCCACGACGATCAACTTCGCC
TTCAACTCGGCCGAGTTGGATGCCGAGGCGCGCAATATTCTCGCCCAACAGGCCGCGTTTATCCGCAACTTCCCCGAAGT
GCGCTTCTCCGTCTACGGTCACACCGATGCGGTCGGGTCCAACGGCTACAACCAGCGCCTGGGCCGGCGCCGCGCCCGCG
CAGCCGTGAACTTTCTTGTATCTCAAGGCGTCAGCCGTCATCGCCTGGCCGCGCTGGTTTCGTTGGGCGAGACCCAGCCC
GTCGTCGCCACTGACATGGAAGAGCGTCGCAATCGCCGCACGGTGACAGAGGTGTCCGGGTTCATGGAGAATGATCCCAT
GGTTCTTGACGGTCGATACGCCGAGATCATCTACCGCAGCTATCGCTCGGGCGTGGGCGGCGTCGACGGAGGGGGCGGCG
GCGCACCTGGTTAA

Upstream 100 bases:

>100_bases
CTGGCAGCTCGCCGCGCCCCGGCACGGCCGCAGGCGATGTGGCGCAACAGGATTTCTCCGGCTCCTATGGCTATGTGCTG
GATTGAGAGGGACACAGATC

Downstream 100 bases:

>100_bases
CCGGTCGCGGCCTCGACAGCCTCTAAAATCCCTACAATTAAAGACAAAACCGCGCCAAGTGATCCGACTTGGCGCGGTTT
TCTGTTTGGCGACAAAGCGA

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTKALHSRRSVLASLGSTLALTACGSTFVETGRPLGAHLDEGQFGGPTRSNIGVHNGDIQWAEILGERFANSVPTTINFA
FNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGSNGYNQRLGRRRARAAVNFLVSQGVSRHRLAALVSLGETQP
VVATDMEERRNRRTVTEVSGFMENDPMVLDGRYAEIIYRSYRSGVGGVDGGGGGAPG

Sequences:

>Translated_217_residues
MTKALHSRRSVLASLGSTLALTACGSTFVETGRPLGAHLDEGQFGGPTRSNIGVHNGDIQWAEILGERFANSVPTTINFA
FNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGSNGYNQRLGRRRARAAVNFLVSQGVSRHRLAALVSLGETQP
VVATDMEERRNRRTVTEVSGFMENDPMVLDGRYAEIIYRSYRSGVGGVDGGGGGAPG
>Mature_216_residues
TKALHSRRSVLASLGSTLALTACGSTFVETGRPLGAHLDEGQFGGPTRSNIGVHNGDIQWAEILGERFANSVPTTINFAF
NSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGSNGYNQRLGRRRARAAVNFLVSQGVSRHRLAALVSLGETQPV
VATDMEERRNRRTVTEVSGFMENDPMVLDGRYAEIIYRSYRSGVGGVDGGGGGAPG

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 23298; Mature: 23167

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKALHSRRSVLASLGSTLALTACGSTFVETGRPLGAHLDEGQFGGPTRSNIGVHNGDIQ
CCHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
WAEILGERFANSVPTTINFAFNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGS
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NGYNQRLGRRRARAAVNFLVSQGVSRHRLAALVSLGETQPVVATDMEERRNRRTVTEVSG
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH
FMENDPMVLDGRYAEIIYRSYRSGVGGVDGGGGGAPG
HHCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKALHSRRSVLASLGSTLALTACGSTFVETGRPLGAHLDEGQFGGPTRSNIGVHNGDIQ
CHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
WAEILGERFANSVPTTINFAFNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGS
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NGYNQRLGRRRARAAVNFLVSQGVSRHRLAALVSLGETQPVVATDMEERRNRRTVTEVSG
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH
FMENDPMVLDGRYAEIIYRSYRSGVGGVDGGGGGAPG
HHCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]