| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053486
Identifier: 89053486
GI number: 89053486
Start: 953377
End: 954636
Strand: Reverse
Name: 89053486
Synonym: Jann_0995
Alternate gene names: NA
Gene position: 954636-953377 (Counterclockwise)
Preceding gene: 89053487
Following gene: 89053485
Centisome position: 22.11
GC content: 59.92
Gene sequence:
>1260_bases ATGAGCAGCGGACTGGCATTACACTCCGAACCGGCCCCGATTGTGGCCTGTACAGTATCCAGCAAGGTCCATCACTTTGG CCTTCTGATTGAAGATATGGAGCAGGAGCTTGGCGAAGCCTGGGGCGACCTTGGCTTTGACGAAGCACGGGAATTCATCA ACGCGCTCGACGAGGGCACGCTTGATTTCATAGCGCTCGCCGTTCGGGAAGAAGACGAATCCGACCTTGGCCGCGTGGGC GAAGTGATCAATGCCGCCCGCACCAAGGGCGTGGCCGTTATCCTGATCCCCGAAAATCTGTCCACCGCCGGCCTGCGCGA GTTGTTGCGCTTGGGCGCCGATGACTTTGTGCCCTACCCCCTCGCGGAAGGGGCTTTGCACGACGCGATTGAAAAGATTG CCCGCGCCAAGCAGCCGGATCCTGCCGAGGTCACTCCGATCCCAGCGTCCGAGGCCCCCGCGACGGGCCAACGGCTGGAT GGCCAGTCAGCCATCTTCGCCGTCCAGAACCTGGCCGGTGGCACGGGCGCGACCACCCTCGCCGTCAATTTAGCCTGGGA ACTGGCCCATGCCGACAAGAAGAATCCACCCTCCGTCTGTGTGCTGGATTTTGACCTGCAACAAGGCTCTGTTGCGACTT ATCTGGACCTTCCGCGCCGCGATATCGTGTTGGAATTGTTACAGGATGCCGCAACGATGGACACTGACGGCTTCAAGCAG GCGCTCGTCAATTATGGCGATAAAATATCCGTTTTCACCACGCCGGCAGAGATCGTTCCCCTCGATCTGATCGGGCCGGA GGAGGTAACCGCCGTCGTGGATCTGGCCGCACAATGCTTCGACATTGTCGTCATCGATATGCCGCGCACCATGGTGATGT GGACCGAAACCGTACTGACCCGCGCCGATGTTTATTTCGCCACGATGGAGCTGGATCTGCGCTCCGCCCAGAACGCCATG CGCTTCATCAAGGCCTGCCAATCCGAAGATCTGCCGCTTGAGAAGATGAACTACGTCATCAATCGCGCACCGGGGCTCAC GGATCTCAACGGCAAGAACCGGATGAAGAAGATGGCCGACAGTCTGGGCGTTGCCTTCTCCACCCATCTGCCGGACGGGG GCAAACCTGTGATGCAGGCCGGCGACAACGGGGAGACCTTGGCCGAAGCTGCCAAGAAGAACCCGCTTCGGAAGGAAATC CTGAAGCTGTCCGAGGGCCTGTTCAAGGCCATGGCAGCGGATGCGCGAGCCAAAGGGTAA
Upstream 100 bases:
>100_bases TGGGGCGTAATGGAAGTCGCGGCAAACTGGCCACAATGGGCACGTCAAAGCCGTAGGCAGAAACGATCCGGGAAGCCCGG GCAGATGTGGGATTTGAGGA
Downstream 100 bases:
>100_bases GATTATGTTTTCCAAATACAAAAAGGCTCCAAAGGGTGGCGAGGTCGCGCATATTACCGACGTGGCAGCCGCGCCAAAGA CCGACGACGCGCCCGCACCA
Product: ATPase
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Protein ATPase; Two-Component Response Regulator; Pilus Assembly ATPase CpaE; Response Regulator Receiver; ATPase; Pilus Assembly Protein; Flp Pilus Assembly ATPase CpaE; CtpF Protein; Septum Site-Determining Protein; Chromosome Partitioning ATPase; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; PP-Loop Family ATPase; Flp Pilus Assembly Response Receiver ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSSGLALHSEPAPIVACTVSSKVHHFGLLIEDMEQELGEAWGDLGFDEAREFINALDEGTLDFIALAVREEDESDLGRVG EVINAARTKGVAVILIPENLSTAGLRELLRLGADDFVPYPLAEGALHDAIEKIARAKQPDPAEVTPIPASEAPATGQRLD GQSAIFAVQNLAGGTGATTLAVNLAWELAHADKKNPPSVCVLDFDLQQGSVATYLDLPRRDIVLELLQDAATMDTDGFKQ ALVNYGDKISVFTTPAEIVPLDLIGPEEVTAVVDLAAQCFDIVVIDMPRTMVMWTETVLTRADVYFATMELDLRSAQNAM RFIKACQSEDLPLEKMNYVINRAPGLTDLNGKNRMKKMADSLGVAFSTHLPDGGKPVMQAGDNGETLAEAAKKNPLRKEI LKLSEGLFKAMAADARAKG
Sequences:
>Translated_419_residues MSSGLALHSEPAPIVACTVSSKVHHFGLLIEDMEQELGEAWGDLGFDEAREFINALDEGTLDFIALAVREEDESDLGRVG EVINAARTKGVAVILIPENLSTAGLRELLRLGADDFVPYPLAEGALHDAIEKIARAKQPDPAEVTPIPASEAPATGQRLD GQSAIFAVQNLAGGTGATTLAVNLAWELAHADKKNPPSVCVLDFDLQQGSVATYLDLPRRDIVLELLQDAATMDTDGFKQ ALVNYGDKISVFTTPAEIVPLDLIGPEEVTAVVDLAAQCFDIVVIDMPRTMVMWTETVLTRADVYFATMELDLRSAQNAM RFIKACQSEDLPLEKMNYVINRAPGLTDLNGKNRMKKMADSLGVAFSTHLPDGGKPVMQAGDNGETLAEAAKKNPLRKEI LKLSEGLFKAMAADARAKG >Mature_418_residues SSGLALHSEPAPIVACTVSSKVHHFGLLIEDMEQELGEAWGDLGFDEAREFINALDEGTLDFIALAVREEDESDLGRVGE VINAARTKGVAVILIPENLSTAGLRELLRLGADDFVPYPLAEGALHDAIEKIARAKQPDPAEVTPIPASEAPATGQRLDG QSAIFAVQNLAGGTGATTLAVNLAWELAHADKKNPPSVCVLDFDLQQGSVATYLDLPRRDIVLELLQDAATMDTDGFKQA LVNYGDKISVFTTPAEIVPLDLIGPEEVTAVVDLAAQCFDIVVIDMPRTMVMWTETVLTRADVYFATMELDLRSAQNAMR FIKACQSEDLPLEKMNYVINRAPGLTDLNGKNRMKKMADSLGVAFSTHLPDGGKPVMQAGDNGETLAEAAKKNPLRKEIL KLSEGLFKAMAADARAKG
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45065; Mature: 44934
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGLALHSEPAPIVACTVSSKVHHFGLLIEDMEQELGEAWGDLGFDEAREFINALDEGT CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC LDFIALAVREEDESDLGRVGEVINAARTKGVAVILIPENLSTAGLRELLRLGADDFVPYP HHHEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC LAEGALHDAIEKIARAKQPDPAEVTPIPASEAPATGQRLDGQSAIFAVQNLAGGTGATTL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE AVNLAWELAHADKKNPPSVCVLDFDLQQGSVATYLDLPRRDIVLELLQDAATMDTDGFKQ EEEEHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHH ALVNYGDKISVFTTPAEIVPLDLIGPEEVTAVVDLAAQCFDIVVIDMPRTMVMWTETVLT HHHCCCCEEEEEECCHHHEEEECCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH RADVYFATMELDLRSAQNAMRFIKACQSEDLPLEKMNYVINRAPGLTDLNGKNRMKKMAD HHHEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH SLGVAFSTHLPDGGKPVMQAGDNGETLAEAAKKNPLRKEILKLSEGLFKAMAADARAKG HHCCEEECCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSGLALHSEPAPIVACTVSSKVHHFGLLIEDMEQELGEAWGDLGFDEAREFINALDEGT CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC LDFIALAVREEDESDLGRVGEVINAARTKGVAVILIPENLSTAGLRELLRLGADDFVPYP HHHEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC LAEGALHDAIEKIARAKQPDPAEVTPIPASEAPATGQRLDGQSAIFAVQNLAGGTGATTL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE AVNLAWELAHADKKNPPSVCVLDFDLQQGSVATYLDLPRRDIVLELLQDAATMDTDGFKQ EEEEHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHH ALVNYGDKISVFTTPAEIVPLDLIGPEEVTAVVDLAAQCFDIVVIDMPRTMVMWTETVLT HHHCCCCEEEEEECCHHHEEEECCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH RADVYFATMELDLRSAQNAMRFIKACQSEDLPLEKMNYVINRAPGLTDLNGKNRMKKMAD HHHEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH SLGVAFSTHLPDGGKPVMQAGDNGETLAEAAKKNPLRKEILKLSEGLFKAMAADARAKG HHCCEEECCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA