| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053435
Identifier: 89053435
GI number: 89053435
Start: 902243
End: 902455
Strand: Reverse
Name: 89053435
Synonym: Jann_0944
Alternate gene names: NA
Gene position: 902455-902243 (Counterclockwise)
Preceding gene: 89053440
Following gene: 89053433
Centisome position: 20.9
GC content: 60.56
Gene sequence:
>213_bases ATGGAGATGTCTGAGATCACGCAATTGGAAGAGCAGCTGGCGCATTTGACCAAGGCGATGGACGACATGTCCGATGTGGT CGCGCGCCAGGACGCAGAAATCGCGGTGCTGACGCGGCGAGTGGAGATGCTGATGTCGCGAGAGGCGGAGAGGGAGATTG AGGGCAACAGCGGGTCCGTCCCGCTGGCAGACCAAAAGCCGCCGCATTGGTAA
Upstream 100 bases:
>100_bases TTGGGGCGGGGCTGTTTTTTCTGCTTGGCCATGGCGGGCGTGCCTTCAAATCGGATCGCGCACCGTCTAACGGGTGGGGC GTACAGGGGCAAGGAGGGCG
Downstream 100 bases:
>100_bases GGCGCTACGCGGGCGCTGGCACAAAAGGCGCGCGCGGGCGGGATCGCAGCAGGATGTAGACCATGACGCCCACGTTCACC GCATTGAACGCAATCCCGTT
Product: SlyX protein
Products: NA
Alternate protein names: Conserved Domain Protein; SlyX Family Protein
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MEMSEITQLEEQLAHLTKAMDDMSDVVARQDAEIAVLTRRVEMLMSREAEREIEGNSGSVPLADQKPPHW
Sequences:
>Translated_70_residues MEMSEITQLEEQLAHLTKAMDDMSDVVARQDAEIAVLTRRVEMLMSREAEREIEGNSGSVPLADQKPPHW >Mature_70_residues MEMSEITQLEEQLAHLTKAMDDMSDVVARQDAEIAVLTRRVEMLMSREAEREIEGNSGSVPLADQKPPHW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7952; Mature: 7952
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMSEITQLEEQLAHLTKAMDDMSDVVARQDAEIAVLTRRVEMLMSREAEREIEGNSGSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PLADQKPPHW CCCCCCCCCC >Mature Secondary Structure MEMSEITQLEEQLAHLTKAMDDMSDVVARQDAEIAVLTRRVEMLMSREAEREIEGNSGSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PLADQKPPHW CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA