Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053440

Identifier: 89053440

GI number: 89053440

Start: 907146

End: 907577

Strand: Reverse

Name: 89053440

Synonym: Jann_0949

Alternate gene names: NA

Gene position: 907577-907146 (Counterclockwise)

Preceding gene: 89053441

Following gene: 89053435

Centisome position: 21.02

GC content: 64.58

Gene sequence:

>432_bases
GTGGCTGCCACTACCCATATGTTGAAGCTGTGCGTCGGCGCGACCTGCGTTGAGGATCTGTTGGACTGGCAGGCCAGCGC
GCGCGCCAAGGGGCCAGACGGCCTGCCGCGCCACGTGACGCGGATGTGGCCCAAGCGCGCCGAAGAGGTACTGAATGGCG
GCTCGCTCTACTGGGTGTTCAAAGGCGTTATCCTGTGTCGTCAACCGATTGTGCGCTTTGATCCCGTGGACCGGGGAGAT
GGGATTAACCGCTGCGGCATCGTGCTGAACCCCAACGTGACCCGCGTCGCCGCGACGCCCAAACGCGCTTTTCAGGGCTG
GCGCTACCTGCAACCCGGCGATGCGCCGCGGGATCTGCGCGCGGGCTCCAAACAGCAAGAAGCGTTGCCACCGCAATTGG
AAAGCGCCCTGGCAGAGATCGGCGTGCTTTGA

Upstream 100 bases:

>100_bases
ACAGGAAATCCGCGCAATTTCGCCACGCCCTTCACCTGACGGGTTGCCGATGGGGCCTCAAGTGTTACTTTAGTCGCTAC
ATCATCTTGGGGGATGACCC

Downstream 100 bases:

>100_bases
GGACAAAGAGGCCGGACACCTTACGATGCCCGGCCCGATACTCATTACAAACTATTGAAAGCGTTTAGCTCAATGACGTT
AGCCTAGCGGAAGGTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAATTHMLKLCVGATCVEDLLDWQASARAKGPDGLPRHVTRMWPKRAEEVLNGGSLYWVFKGVILCRQPIVRFDPVDRGD
GINRCGIVLNPNVTRVAATPKRAFQGWRYLQPGDAPRDLRAGSKQQEALPPQLESALAEIGVL

Sequences:

>Translated_143_residues
MAATTHMLKLCVGATCVEDLLDWQASARAKGPDGLPRHVTRMWPKRAEEVLNGGSLYWVFKGVILCRQPIVRFDPVDRGD
GINRCGIVLNPNVTRVAATPKRAFQGWRYLQPGDAPRDLRAGSKQQEALPPQLESALAEIGVL
>Mature_142_residues
AATTHMLKLCVGATCVEDLLDWQASARAKGPDGLPRHVTRMWPKRAEEVLNGGSLYWVFKGVILCRQPIVRFDPVDRGDG
INRCGIVLNPNVTRVAATPKRAFQGWRYLQPGDAPRDLRAGSKQQEALPPQLESALAEIGVL

Specific function: Unknown

COG id: COG5458

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15743; Mature: 15612

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATTHMLKLCVGATCVEDLLDWQASARAKGPDGLPRHVTRMWPKRAEEVLNGGSLYWVF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
KGVILCRQPIVRFDPVDRGDGINRCGIVLNPNVTRVAATPKRAFQGWRYLQPGDAPRDLR
HHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHCCCCCCCCCCCCHHHH
AGSKQQEALPPQLESALAEIGVL
CCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AATTHMLKLCVGATCVEDLLDWQASARAKGPDGLPRHVTRMWPKRAEEVLNGGSLYWVF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
KGVILCRQPIVRFDPVDRGDGINRCGIVLNPNVTRVAATPKRAFQGWRYLQPGDAPRDLR
HHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHCCCCCCCCCCCCHHHH
AGSKQQEALPPQLESALAEIGVL
CCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA