| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053415
Identifier: 89053415
GI number: 89053415
Start: 881038
End: 881487
Strand: Reverse
Name: 89053415
Synonym: Jann_0924
Alternate gene names: NA
Gene position: 881487-881038 (Counterclockwise)
Preceding gene: 89053416
Following gene: 89053414
Centisome position: 20.41
GC content: 62.67
Gene sequence:
>450_bases ATGATCCGCGCAACTGCGCTTGCGGCAACCCTGATGTCCCTCGCCCTGCCCGTCTCCGCTCAATCCACGTTTGAGCGGTT GGAGGCTGTCGCCGTCACCATGAACGGTATGATGTTTGATGCGATGGTCGCCCAAACCCCTGCGTTGGAAGGCAATATGC CGACGGCGGAATGGTCCGACGGCCTGCGAACGGCTTACCAATGCATGTATGACGGGTTTCTGGAGCGCGCGGGCGAGCCT GCCATGGCCGAGATGGTCACCGCGATGGAGGACCAGCTGGCAACCGTGACCCCGGAAGAGATCCTGAATGGCGGGGCCGA GATCGAAAACCCCGAAGGCCTCAGCGATGAGCAGGCCGCCGAGATCGTCGCGGGCTGCGGCATGATGGAGGCGTTCATGA CCCACATGTCCTCATCCGGCGCGCTTCAGATCCTGATGCAGGACGGCTGA
Upstream 100 bases:
>100_bases CCGCGTCCGAGGTGCAGCAGATCAACACCGATTGCGGCCTGCTGGAGCTGCAAATGCAACGGCTTGCGGAATCGGGCGCG ATGCAGGCGCTGCAAAACCA
Downstream 100 bases:
>100_bases TGGCCCACCGCGCCAAGGGGGAGCCGTCGGCCTATGCCAGTGCGCCCGCCTATGATGACGGACGGCTTGACGCGCCCGCC GCCCTGCGCAACCGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MIRATALAATLMSLALPVSAQSTFERLEAVAVTMNGMMFDAMVAQTPALEGNMPTAEWSDGLRTAYQCMYDGFLERAGEP AMAEMVTAMEDQLATVTPEEILNGGAEIENPEGLSDEQAAEIVAGCGMMEAFMTHMSSSGALQILMQDG
Sequences:
>Translated_149_residues MIRATALAATLMSLALPVSAQSTFERLEAVAVTMNGMMFDAMVAQTPALEGNMPTAEWSDGLRTAYQCMYDGFLERAGEP AMAEMVTAMEDQLATVTPEEILNGGAEIENPEGLSDEQAAEIVAGCGMMEAFMTHMSSSGALQILMQDG >Mature_149_residues MIRATALAATLMSLALPVSAQSTFERLEAVAVTMNGMMFDAMVAQTPALEGNMPTAEWSDGLRTAYQCMYDGFLERAGEP AMAEMVTAMEDQLATVTPEEILNGGAEIENPEGLSDEQAAEIVAGCGMMEAFMTHMSSSGALQILMQDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15809; Mature: 15809
Theoretical pI: Translated: 3.57; Mature: 3.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 10.7 %Met (Translated Protein) 12.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 10.7 %Met (Mature Protein) 12.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRATALAATLMSLALPVSAQSTFERLEAVAVTMNGMMFDAMVAQTPALEGNMPTAEWSD CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHH GLRTAYQCMYDGFLERAGEPAMAEMVTAMEDQLATVTPEEILNGGAEIENPEGLSDEQAA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH EIVAGCGMMEAFMTHMSSSGALQILMQDG HHHHHCHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MIRATALAATLMSLALPVSAQSTFERLEAVAVTMNGMMFDAMVAQTPALEGNMPTAEWSD CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHH GLRTAYQCMYDGFLERAGEPAMAEMVTAMEDQLATVTPEEILNGGAEIENPEGLSDEQAA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH EIVAGCGMMEAFMTHMSSSGALQILMQDG HHHHHCHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA