Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053414

Identifier: 89053414

GI number: 89053414

Start: 880364

End: 881038

Strand: Reverse

Name: 89053414

Synonym: Jann_0923

Alternate gene names: NA

Gene position: 881038-880364 (Counterclockwise)

Preceding gene: 89053415

Following gene: 89053413

Centisome position: 20.4

GC content: 69.33

Gene sequence:

>675_bases
ATGGCCCACCGCGCCAAGGGGGAGCCGTCGGCCTATGCCAGTGCGCCCGCCTATGATGACGGACGGCTTGACGCGCCCGC
CGCCCTGCGCAACCGCGATGCGTTGACGGCGGCCTTGACCACACTCGCGCCAGACGGTCGCGCGTTGGAAATCGCGTCCG
GCACCGGCCAGCACGTCATCCGCTTTGCCCCTGCGATGCCGGGCTTGCACTGGCAGCCCACGGACCCCGACCCGGATCGC
CGCGCGTCCATCGCCGCCTGGATGGCGGCGGAACCTGCGCCCAACATCGCCGCTCCGATCCATCTGGATGCTTGCGCGCC
CGGGTGGGCGGCGCAGCACGATCCCTTTGACATAATCTTCCTCGCCAACCTCCTGCACCTTGTCCCCGATGCGGCGGCGA
AAATCTGCCTGACAGAGATGGCCCATGCCCTGGCCCCAGGTGGGTGCGCATTGGTCTACGGGCCGTTCCTGCGCGACGGC
AAGACCACGTCCGAGGGCGATGCGGCGTTTGACGCCCGCCTCAAGGTCGAAAACCCCGGCGCGGGGTACAAGGACCTGGC
TTGGGTGATGGACATCTGGCGCGCAGCTGGCCTCACCCCCGCCCCGCCGCAGGCCATGCCTGCCAACAACCTGCTCCTCC
GCGCGACCCGTTCCGCCGCTTCGGACGTGACGTAA

Upstream 100 bases:

>100_bases
AGCAGGCCGCCGAGATCGTCGCGGGCTGCGGCATGATGGAGGCGTTCATGACCCACATGTCCTCATCCGGCGCGCTTCAG
ATCCTGATGCAGGACGGCTG

Downstream 100 bases:

>100_bases
ACACACGTTTCGCTTTCCTGTAATCCGGTGGTAAGTCACGTTAATCAACTCGCCCGCACGATGTGCGCGGGTCCAGACCA
GACGTGAAGACCGGAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MAHRAKGEPSAYASAPAYDDGRLDAPAALRNRDALTAALTTLAPDGRALEIASGTGQHVIRFAPAMPGLHWQPTDPDPDR
RASIAAWMAAEPAPNIAAPIHLDACAPGWAAQHDPFDIIFLANLLHLVPDAAAKICLTEMAHALAPGGCALVYGPFLRDG
KTTSEGDAAFDARLKVENPGAGYKDLAWVMDIWRAAGLTPAPPQAMPANNLLLRATRSAASDVT

Sequences:

>Translated_224_residues
MAHRAKGEPSAYASAPAYDDGRLDAPAALRNRDALTAALTTLAPDGRALEIASGTGQHVIRFAPAMPGLHWQPTDPDPDR
RASIAAWMAAEPAPNIAAPIHLDACAPGWAAQHDPFDIIFLANLLHLVPDAAAKICLTEMAHALAPGGCALVYGPFLRDG
KTTSEGDAAFDARLKVENPGAGYKDLAWVMDIWRAAGLTPAPPQAMPANNLLLRATRSAASDVT
>Mature_223_residues
AHRAKGEPSAYASAPAYDDGRLDAPAALRNRDALTAALTTLAPDGRALEIASGTGQHVIRFAPAMPGLHWQPTDPDPDRR
ASIAAWMAAEPAPNIAAPIHLDACAPGWAAQHDPFDIIFLANLLHLVPDAAAKICLTEMAHALAPGGCALVYGPFLRDGK
TTSEGDAAFDARLKVENPGAGYKDLAWVMDIWRAAGLTPAPPQAMPANNLLLRATRSAASDVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=201, Percent_Identity=35.3233830845771, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI93102391, Length=142, Percent_Identity=35.2112676056338, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71998087, Length=204, Percent_Identity=32.843137254902, Blast_Score=110, Evalue=6e-25,
Organism=Drosophila melanogaster, GI28574095, Length=196, Percent_Identity=31.1224489795918, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23480; Mature: 23349

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRAKGEPSAYASAPAYDDGRLDAPAALRNRDALTAALTTLAPDGRALEIASGTGQHVI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEE
RFAPAMPGLHWQPTDPDPDRRASIAAWMAAEPAPNIAAPIHLDACAPGWAAQHDPFDIIF
EECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH
LANLLHLVPDAAAKICLTEMAHALAPGGCALVYGPFLRDGKTTSEGDAAFDARLKVENPG
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCEEEEEEEECCCC
AGYKDLAWVMDIWRAAGLTPAPPQAMPANNLLLRATRSAASDVT
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCC
>Mature Secondary Structure 
AHRAKGEPSAYASAPAYDDGRLDAPAALRNRDALTAALTTLAPDGRALEIASGTGQHVI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEE
RFAPAMPGLHWQPTDPDPDRRASIAAWMAAEPAPNIAAPIHLDACAPGWAAQHDPFDIIF
EECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH
LANLLHLVPDAAAKICLTEMAHALAPGGCALVYGPFLRDGKTTSEGDAAFDARLKVENPG
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCEEEEEEEECCCC
AGYKDLAWVMDIWRAAGLTPAPPQAMPANNLLLRATRSAASDVT
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA