Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053416

Identifier: 89053416

GI number: 89053416

Start: 881484

End: 881939

Strand: Reverse

Name: 89053416

Synonym: Jann_0925

Alternate gene names: NA

Gene position: 881939-881484 (Counterclockwise)

Preceding gene: 89053417

Following gene: 89053415

Centisome position: 20.42

GC content: 66.01

Gene sequence:

>456_bases
ATGCCCCGCTATATCCTGCGCGTAGGCGTGACCGCCCTGCTCATGACCCTGCCCCTCGCCGCCTCGGCTCAATCGCAACT
TGATCGGTTCGAGGCGCTCAGCGAGCAGATGACGACCCTCACCTACCAGGGTCTTGCCGAGCAATATCCGGTTCTGAACG
GCCTCTTGCCTGCCGCCGATTGGGGCCGCCCCGAGCGTCGTGCGGGCCGCTGCGCCCTGCGTCGGTACAACCGGGCCGTG
GGCGAAGATGGGGTTGCGGCGATGCTGTCGGAGCTGGAAGCCTCCATCGCGTCTGCCCGACCGTCCGACCTTCTGGACGG
CACATTCGAGGCTGGCGTGCCCGAGGGTCTGACCGCGTCCGAGGTGCAGCAGATCAACACCGATTGCGGCCTGCTGGAGC
TGCAAATGCAACGGCTTGCGGAATCGGGCGCGATGCAGGCGCTGCAAAACCAATGA

Upstream 100 bases:

>100_bases
GTGATTCTGCCCAGCCCGATTAAAAGGTGCGGAAACCCCGAACTTGGAACTCCCCGCCAGAGGCCCTATTCTATTTCCAA
ACCACTTTTCGGAGAACCAT

Downstream 100 bases:

>100_bases
TCCGCGCAACTGCGCTTGCGGCAACCCTGATGTCCCTCGCCCTGCCCGTCTCCGCTCAATCCACGTTTGAGCGGTTGGAG
GCTGTCGCCGTCACCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPRYILRVGVTALLMTLPLAASAQSQLDRFEALSEQMTTLTYQGLAEQYPVLNGLLPAADWGRPERRAGRCALRRYNRAV
GEDGVAAMLSELEASIASARPSDLLDGTFEAGVPEGLTASEVQQINTDCGLLELQMQRLAESGAMQALQNQ

Sequences:

>Translated_151_residues
MPRYILRVGVTALLMTLPLAASAQSQLDRFEALSEQMTTLTYQGLAEQYPVLNGLLPAADWGRPERRAGRCALRRYNRAV
GEDGVAAMLSELEASIASARPSDLLDGTFEAGVPEGLTASEVQQINTDCGLLELQMQRLAESGAMQALQNQ
>Mature_150_residues
PRYILRVGVTALLMTLPLAASAQSQLDRFEALSEQMTTLTYQGLAEQYPVLNGLLPAADWGRPERRAGRCALRRYNRAVG
EDGVAAMLSELEASIASARPSDLLDGTFEAGVPEGLTASEVQQINTDCGLLELQMQRLAESGAMQALQNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16339; Mature: 16208

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYILRVGVTALLMTLPLAASAQSQLDRFEALSEQMTTLTYQGLAEQYPVLNGLLPAAD
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
WGRPERRAGRCALRRYNRAVGEDGVAAMLSELEASIASARPSDLLDGTFEAGVPEGLTAS
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHH
EVQQINTDCGLLELQMQRLAESGAMQALQNQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRYILRVGVTALLMTLPLAASAQSQLDRFEALSEQMTTLTYQGLAEQYPVLNGLLPAAD
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
WGRPERRAGRCALRRYNRAVGEDGVAAMLSELEASIASARPSDLLDGTFEAGVPEGLTAS
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHH
EVQQINTDCGLLELQMQRLAESGAMQALQNQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA