| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053072
Identifier: 89053072
GI number: 89053072
Start: 570598
End: 570840
Strand: Reverse
Name: 89053072
Synonym: Jann_0581
Alternate gene names: NA
Gene position: 570840-570598 (Counterclockwise)
Preceding gene: 89053085
Following gene: 89053070
Centisome position: 13.22
GC content: 59.67
Gene sequence:
>243_bases ATGGGCGCTCATCGCAAACCCTCATCGCGTCTTTATTTTGGATCCAACGGAAAAGGGCGCGCACACGGCGCACCCCGTCA GACTGCCGCGCGTATAGGCGGAGTCGCCGGGGCTGGCAAGGGGCATTTGGGGCCTCGGCTCACTCACGCAAAGACCTTCA CCATGTTCTTGGCTTGCTGGATCTGCGACCTCAAGATCATCGTGGATGTCGAGCGCTTGGACGCATCGTGGCTGACAGAC TAA
Upstream 100 bases:
>100_bases CGAGAACCCGGTAGTCAAACGCCTTCAGGCGAATGCGGATGTTCTGGCTGACTGCCATGTGATATCACCCTTTATCATAG GGCCTAGAACGGATTGGAGG
Downstream 100 bases:
>100_bases ATGGTCGCCTGCGCCAAGTCACACCACAAGATGTTGTCTTGGTCTGGATACCATTCGACGGCCATTCCGCGCTCGATCAT CTCATCCGCAAAACTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MGAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACWICDLKIIVDVERLDASWLTD
Sequences:
>Translated_80_residues MGAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACWICDLKIIVDVERLDASWLTD >Mature_79_residues GAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACWICDLKIIVDVERLDASWLTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8604; Mature: 8473
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACW CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ICDLKIIVDVERLDASWLTD HHHHHHEEEHHHCCCCCCCC >Mature Secondary Structure GAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACW CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ICDLKIIVDVERLDASWLTD HHHHHHEEEHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA