Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053072

Identifier: 89053072

GI number: 89053072

Start: 570598

End: 570840

Strand: Reverse

Name: 89053072

Synonym: Jann_0581

Alternate gene names: NA

Gene position: 570840-570598 (Counterclockwise)

Preceding gene: 89053085

Following gene: 89053070

Centisome position: 13.22

GC content: 59.67

Gene sequence:

>243_bases
ATGGGCGCTCATCGCAAACCCTCATCGCGTCTTTATTTTGGATCCAACGGAAAAGGGCGCGCACACGGCGCACCCCGTCA
GACTGCCGCGCGTATAGGCGGAGTCGCCGGGGCTGGCAAGGGGCATTTGGGGCCTCGGCTCACTCACGCAAAGACCTTCA
CCATGTTCTTGGCTTGCTGGATCTGCGACCTCAAGATCATCGTGGATGTCGAGCGCTTGGACGCATCGTGGCTGACAGAC
TAA

Upstream 100 bases:

>100_bases
CGAGAACCCGGTAGTCAAACGCCTTCAGGCGAATGCGGATGTTCTGGCTGACTGCCATGTGATATCACCCTTTATCATAG
GGCCTAGAACGGATTGGAGG

Downstream 100 bases:

>100_bases
ATGGTCGCCTGCGCCAAGTCACACCACAAGATGTTGTCTTGGTCTGGATACCATTCGACGGCCATTCCGCGCTCGATCAT
CTCATCCGCAAAACTCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MGAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACWICDLKIIVDVERLDASWLTD

Sequences:

>Translated_80_residues
MGAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACWICDLKIIVDVERLDASWLTD
>Mature_79_residues
GAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACWICDLKIIVDVERLDASWLTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8604; Mature: 8473

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACW
CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ICDLKIIVDVERLDASWLTD
HHHHHHEEEHHHCCCCCCCC
>Mature Secondary Structure 
GAHRKPSSRLYFGSNGKGRAHGAPRQTAARIGGVAGAGKGHLGPRLTHAKTFTMFLACW
CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ICDLKIIVDVERLDASWLTD
HHHHHHEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA