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The map label for this gene is yciF [H]

Identifier: 89053070

GI number: 89053070

Start: 569330

End: 569851

Strand: Reverse

Name: yciF [H]

Synonym: Jann_0579

Alternate gene names: 89053070

Gene position: 569851-569330 (Counterclockwise)

Preceding gene: 89053072

Following gene: 89053053

Centisome position: 13.2

GC content: 59.77

Gene sequence:

>522_bases
ATGAAACCTGTGGAGATTATCAAGATGACTATCAGCACCCTGCACGACGTGTATCACGACCAACTGCAAGACCTGTACAG
CGCTTGCAAGCAGTCGCTCGACGTGACCAACGACTTGGCCAAAGCGGCCCAGAATGAGGATCTCACGAAAGCGCTCGTCG
CGGGCGCACAGGGCATTTCCGACGGGATGGAGAAGATTGCACAGCTGTGCAATGACCACGACATCAACCCCGACGGTGAG
CATTGCAAAGGTATGGAGGGGCTGGTCAAGGAGGCCCGCGCCCACGGTCTGGACGAGGCCATCGACGATGCCGATGCACG
CGACGCGATGATCATCACGCAGTATCAGCGCATGACACATTATGCGATTGCGGGCTACGGCTGCCTGCGCGCTTTCGCCA
ACCGTCTCGATCTTGACGGCGACGGCGCAGTGCTGACCGAATGCCTGGACGCCGCCTACGAAGGTGACCGCAGCATGACC
GAGATCGCGACAGGGCAAGTCAACCGCGCCGCCGCTGCTTAA

Upstream 100 bases:

>100_bases
TTACATTCGTGTCTGATCCGCAGGTGCGACGCATGTTCCCACACTTCAACCCTTCACGGAACGATTCCGGTCCAAGCCCG
TTGGTATGGCGTAACACCTG

Downstream 100 bases:

>100_bases
GGTATAGCGACATTAATGACAGTTGGACCCGGAGTGTTTGTGCACTCCGGGTCTTTTGCGTTCTAGGCTGCGCCCTTCGG
GCTGTGTGTTTCGTAGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKPVEIIKMTISTLHDVYHDQLQDLYSACKQSLDVTNDLAKAAQNEDLTKALVAGAQGISDGMEKIAQLCNDHDINPDGE
HCKGMEGLVKEARAHGLDEAIDDADARDAMIITQYQRMTHYAIAGYGCLRAFANRLDLDGDGAVLTECLDAAYEGDRSMT
EIATGQVNRAAAA

Sequences:

>Translated_173_residues
MKPVEIIKMTISTLHDVYHDQLQDLYSACKQSLDVTNDLAKAAQNEDLTKALVAGAQGISDGMEKIAQLCNDHDINPDGE
HCKGMEGLVKEARAHGLDEAIDDADARDAMIITQYQRMTHYAIAGYGCLRAFANRLDLDGDGAVLTECLDAAYEGDRSMT
EIATGQVNRAAAA
>Mature_173_residues
MKPVEIIKMTISTLHDVYHDQLQDLYSACKQSLDVTNDLAKAAQNEDLTKALVAGAQGISDGMEKIAQLCNDHDINPDGE
HCKGMEGLVKEARAHGLDEAIDDADARDAMIITQYQRMTHYAIAGYGCLRAFANRLDLDGDGAVLTECLDAAYEGDRSMT
EIATGQVNRAAAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=164, Percent_Identity=32.3170731707317, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18716; Mature: 18716

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVEIIKMTISTLHDVYHDQLQDLYSACKQSLDVTNDLAKAAQNEDLTKALVAGAQGIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHCCHH
DGMEKIAQLCNDHDINPDGEHCKGMEGLVKEARAHGLDEAIDDADARDAMIITQYQRMTH
HHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHH
YAIAGYGCLRAFANRLDLDGDGAVLTECLDAAYEGDRSMTEIATGQVNRAAAA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MKPVEIIKMTISTLHDVYHDQLQDLYSACKQSLDVTNDLAKAAQNEDLTKALVAGAQGIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHCCHH
DGMEKIAQLCNDHDINPDGEHCKGMEGLVKEARAHGLDEAIDDADARDAMIITQYQRMTH
HHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHH
YAIAGYGCLRAFANRLDLDGDGAVLTECLDAAYEGDRSMTEIATGQVNRAAAA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]